Re: Added Autopkgtests for BitSe q – Request for Review

Hi Harish,

harish chavre, on 2025-04-16:
> i have added an  autopkgtest for package bitseq[0] ,
> kindly review and  let me know  if  i am on the right track or suggest any improvements needed.
> [0]: https://salsa.debian.org/med-team/bitseq/-/tree/master/debian/tests?ref_type=heads

I had a look at your stub of autopkgtest, and I think you are on
the right track for bitseq.  As far as I can see, for now, your
test is only checking that bowtie is operating correctly.  Your
next steps will be to use bowtie output as an input for the
various bitseq commands documented in upstream wiki page[1]
(parseAlignment, estimateExpression, getVariance, etc).  Once
all instructions of the wiki are codified and verified working
properly, I think your autopkgtest will be ready for upload.

[1]: https://github.com/BitSeq/BitSeq/wiki/Basic-usage

Have a nice day,  :)
-- 
  .''`.  Étienne Mollier <[email protected]>
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