Bug#1125648: marked as done (libsbml: FTBFS: dpkg-shlibdeps: error: cannot read /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file or directory)
Rafael Laboissière <[email protected]> Fri, 13 Feb 2026 09:47:35 +0100
| Newsgroups | gmane.linux.debian.devel.bugs.general,gmane.linux.debian.devel.medical |
|---|---|
| Organization | Debian GNU/Linux |
| Message-ID | <[email protected]> |
Hi, I fixed Bug#1125648 in version 5.20.5+dfsg-2 of the libsbml package. The bug was caused by the erroneous setting of the CMAKE_INSTALL_LIBDIR CMake variable at the configuration step. A new upstream version (5.21.0) of libsbml is available. I did not check to see if this version fixes the issue. My fix in debian/rules addresses the symptom instead of curing the disease, and will need to be removed at some point in the future. Best, Rafael * Debian Bug Tracking System <[email protected]> [2026-02-08 20:57]: > Your message dated Sun, 08 Feb 2026 20:54:25 +0000 > with message-id <[email protected]> > and subject line Bug#1125648: fixed in libsbml 5.20.5+dfsg-2 > has caused the Debian Bug report #1125648, > regarding libsbml: FTBFS: dpkg-shlibdeps: error: cannot read /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file or directory > to be marked as done. > > This means that you claim that the problem has been dealt with. > If this is not the case it is now your responsibility to reopen the > Bug report if necessary, and/or fix the problem forthwith. > > (NB: If you are a system administrator and have no idea what this > message is talking about, this may indicate a serious mail system > misconfiguration somewhere. Please contact [email protected] > immediately.) > > > -- > 1125648: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1125648 > Debian Bug Tracking System > Contact [email protected] with problems > From: Santiago Vila <[email protected]> > Subject: libsbml: FTBFS: dpkg-shlibdeps: error: cannot read > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file > or directory > Date: Thu, 15 Jan 2026 16:54:18 +0000 > To: Debian BTS <[email protected]> > Message-Id: <[email protected]> > > Package: src:libsbml > Version: 5.20.5+dfsg-1 > Severity: serious > Tags: ftbfs forky sid > > Dear maintainer: > > During a rebuild of all packages in unstable, this package failed to build. > > Below you will find the last part of the build log (probably the most > relevant part, but not necessarily). If required, the full build log > is available here: > > https://people.debian.org/~sanvila/build-logs/202601/ > > About the archive rebuild: The build was made on virtual machines from AWS, > using sbuild and a reduced chroot with only build-essential packages. > > If you cannot reproduce the bug please contact me privately, as I > am willing to provide ssh access to a virtual machine where the bug is > fully reproducible. > > If this is really a bug in one of the build-depends, please use > reassign and add an affects on src:libsbml, so that this is still > visible in the BTS web page for this package. > > Thanks. > > -------------------------------------------------------------------------------- > [...] > debian/rules clean > dh clean --builddir=build --buildsystem=cmake --without autoreconf --no-parallel > dh_auto_clean -O--builddir=build -O--buildsystem=cmake -O--no-parallel > debian/rules execute_after_dh_auto_clean > make[1]: Entering directory '/<<PKGBUILDDIR>>' > ### the clean target of the libsbml makefile is highly b0rken ### > ### the switch to cmake didn't result in great approvements ### > ### still inline changes of files ### > ### very ugly ### > rm -rf build docs/formatted docs/src/doxygen-version-specific.txt docs/src/doxygen-config-cpp.txt \ > docs/src/doxygen-config-csharp.txt docs/src/doxygen-config-perl.txt docs/src/doxygen-config-python.txt \ > docs/src/java-substitutions/libsbmlConstants.java docs/src/libsbml-installation.html docs/src/perlmod/DoxyDocs.pm \ > docs/src/perlmod/DoxyStructure.pm docs/src/perlmod/Makefile docs/src/perlmod/doxyrules.make \ > src/bindings/matlab/runTests.log docs/src/doxygen-config-c.txt src/bindings/matlab/*.mex* docs/src/perlmod \ > docs/src/doxygen_sqlite3.db docs/src/libsbml.py docs/src/common-text/libsbml-version.html > > [... snipped ...] > > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L2v2CompatibilityValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L2v3CompatibilityValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L2v4CompatibilityValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L3v1CompatibilityValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L3v2CompatibilityValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/MathMLConsistencyValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/ModelingPracticeValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/OverdeterminedValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBMLExternalValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBMLInternalValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBMLValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBOConsistencyValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/StrictUnitConsistencyValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/UnitConsistencyValidator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/VConstraint.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/Validator.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/ExpatAttributes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/ExpatHandler.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/ExpatParser.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLAttributes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLHandler.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLNamespaces.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLParser.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLTranscode.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLAttributes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLBuffer.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLConstructorException.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLError.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLErrorLog.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLExtern.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLFileBuffer.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLHandler.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLInputStream.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLLogOverride.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLMemoryBuffer.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLNamespaces.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLNode.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLOutputStream.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLParser.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLToken.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLTokenizer.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLTriple.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesAttributes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesHandler.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesNamespaces.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesParser.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesTranscode.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/AlgebraicRule.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/AssignmentRule.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Compartment.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/CompartmentType.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Constraint.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Delay.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Event.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/EventAssignment.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/ExpectedAttributes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/FunctionDefinition.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/InitialAssignment.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/KineticLaw.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/ListOf.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/LocalParameter.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Model.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/ModifierSpeciesReference.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Parameter.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Priority.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/RateRule.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Reaction.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Rule.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLConstructorException.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLDocument.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLError.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLErrorLog.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLErrorTable.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLNamespaces.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLReader.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLTransforms.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLTypeCodes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLTypes.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLVisitor.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLWriter.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBO.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBase.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SimpleSpeciesReference.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Species.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SpeciesReference.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SpeciesType.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/StoichiometryMath.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SyntaxChecker.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Trigger.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Unit.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/UnitDefinition.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/UnitKind.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-config-common.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-config-packages.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-namespace.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-package.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-version.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/extension/RegisterExtensions.h > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml.so.5.20.5 > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml.so.5 > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml.so > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-targets.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-targets-none.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-config-version.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-config.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml-static.a > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-targets.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-targets-none.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-config-version.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-config.cmake > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbmlj.so > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/java/libsbmlj.jar > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/x86_64-linux-gnu/perl5/5.40/LibSBML.pod > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/x86_64-linux-gnu/perl5/5.40/LibSBML.pm > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/x86_64-linux-gnu/perl5/5.40/auto/LibSBML/LibSBML.so > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/TranslateSBML.mex > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/OutputSBML.mex > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/addLevelVersion.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/applyUserValidation.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/CheckAndConvert.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/Contents.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/ConvertFormulaToMathML.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getDefaultValues.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getSBMLDefaultStruct.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getStructure.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getStructureEnum.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getStructureFieldnames.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getValueType.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/installSBML.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isEnabled.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isFbcEnabled.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isoctave.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isSBML_Model.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/OutputSBML.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/TranslateSBML.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/compareFiles.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/runTests.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testBinding.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testCVTerms.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testGetSBMLDefaultStruct.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testIsSBMLModel.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testMissingOutput.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testOutput.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFlags.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile1.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile10.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile11.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile12.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile13.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile14.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile15.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile16.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile2.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile3.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile4.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile5.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile6.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile7.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile8.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile9.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc1.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc2.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc3.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc4.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadWriteGeneProductIds.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadWriteGeneProducts.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFbcKeyValuePair.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testAddKeyValuePairs.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testVersionInformation.m > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/algebraicRules.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/both.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/convertedFormulas.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/convertedFormulas2.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/convertedFormulasL2.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/createdAnnotation.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/createdAnnotationL2.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolAvogadro.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolDelay.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolTime-reaction-l2.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolTime.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/errors.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fatal.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcL3V2V1.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcL3V2V2.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV2.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV2Labels.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_groups.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_qual.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_qual_groups.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV3.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV3_1.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_kvp.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/funcDefsWithInitialAssignments.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/functionDefinition.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/groups-example1.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/groups_qual.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/initialAssignments.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-branch.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-minimal.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-rules.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-units.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v2-all.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v1-all.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v1-allelements.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v1-assignment.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v2-all.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v2-newComponents.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v2-newelements.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v3-all.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v3-newelements.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v3-newMath.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v4-all.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v5-all.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v1core.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-empty-event.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-empty-math.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-newmath.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-no-model.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2core.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/math_no_arguments.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/missing_out.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/nestedPiecewise.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/none.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/nonLogicals.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/notes_annotations.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP00.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP01.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP10.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP11.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/piecewise.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/qual.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/rateRules.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/readerror.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/sparseStoichiometry.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/species.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/test-greek.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/warn.xml > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/python3.13/site-packages/libsbml/_libsbml.so > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/python3.13/site-packages/libsbml.pth > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/python3.13/site-packages/libsbml/libsbml.py > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs > -- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs > -- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs > -- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/COPYING.txt > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/FUNDING.txt > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/LICENSE.txt > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/NEWS.txt > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/README.md > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/VERSION.txt > -- Installing: /<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/pkgconfig/libsbml.pc > make[1]: Leaving directory '/<<PKGBUILDDIR>>/build' > debian/rules execute_after_dh_auto_install > make[1]: Entering directory '/<<PKGBUILDDIR>>' > mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/docs/ > sed 's#formatted/##g' docs/index.html.in > /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/docs/index.html > set -x ; \ > for pyv in python3.13 ; do \ > if [ -d /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/${pyv}/site-packages/ ] ; then \ > mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/lib/${pyv}/dist-packages ; \ > mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/${pyv}/site-packages/* /<<PKGBUILDDIR>>/debian/tmp/usr/lib/${pyv}/dist-packages ; \ > fi ; \ > done > + [ -d /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/python3.13/site-packages/ ] > find /<<PKGBUILDDIR>>/debian/tmp/usr -type f -name "*.js" -delete > find /<<PKGBUILDDIR>>/debian/tmp/usr -type f -name "*.md5" -delete > find /<<PKGBUILDDIR>>/debian/tmp/usr -type f -exec chmod 644 {} + > find /<<PKGBUILDDIR>>/debian/tmp/usr/lib -name "*.mex*" -exec strip --strip-unneeded {} + || true > find /<<PKGBUILDDIR>>/debian/tmp/usr/lib -name "*.mex*" -exec strip --remove-section=.comment {} + || true > dpkg-shlibdeps /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex -Tdebian/libsbml5-octave.substvars -l/usr/lib/x86_64-linux-gnu/octave/10.3.0 > dpkg-shlibdeps: error: cannot read /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file or directory > make[1]: *** [debian/rules:91: execute_after_dh_auto_install] Error 25 > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > make: *** [debian/rules:53: binary] Error 2 > dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 > -------------------------------------------------------------------------------- > From: Debian FTP Masters <[email protected]> > Subject: Bug#1125648: fixed in libsbml 5.20.5+dfsg-2 > Date: Sun, 08 Feb 2026 20:54:25 +0000 > To: [email protected] > Reply-To: Rafael Laboissière <[email protected]> > Message-Id: <[email protected]> > > Source: libsbml > Source-Version: 5.20.5+dfsg-2 > Done: Rafael Laboissière <[email protected]> > > We believe that the bug you reported is fixed in the latest version of > libsbml, which is due to be installed in the Debian FTP archive. > > A summary of the changes between this version and the previous one is > attached. > > Thank you for reporting the bug, which will now be closed. If you > have further comments please address them to [email protected], > and the maintainer will reopen the bug report if appropriate. > > Debian distribution maintenance software > pp. > Rafael Laboissière <[email protected]> (supplier of updated libsbml package) > > (This message was generated automatically at their request; if you > believe that there is a problem with it please contact the archive > administrators by mailing [email protected]) > > > -----BEGIN PGP SIGNED MESSAGE----- > Hash: SHA512 > > Format: 1.8 > Date: Sun, 08 Feb 2026 10:31:51 +0000 > Source: libsbml > Architecture: source > Version: 5.20.5+dfsg-2 > Distribution: unstable > Urgency: medium > Maintainer: Debian Med Packaging Team <[email protected]> > Changed-By: Rafael Laboissière <[email protected]> > Closes: 1125648 > Changes: > libsbml (5.20.5+dfsg-2) unstable; urgency=medium > . > * Team upload. > * d/rules: Fix the value of CMAKE_INSTALL_LIBDIR in the CMake cache > (Closes: #1125648) > Checksums-Sha1: > 756e265efa71d9d0c8dc6d3993da8a5e58e7e977 2998 libsbml_5.20.5+dfsg-2.dsc > 53db348cb690f95393b0ad9695d9970008bdcb45 24568 libsbml_5.20.5+dfsg-2.debian.tar.xz > df0cc4fbc53483ffa23c881f8567f440556df060 25180 libsbml_5.20.5+dfsg-2_source.buildinfo > Checksums-Sha256: > 56d29dda51028533d16191db7862477eb9ed85c590ed2b06cc3fe4a99f9a0978 2998 libsbml_5.20.5+dfsg-2.dsc > a4e14d60fd7cd4a62c2747f8e2895e7af80623e26d90f50850b97a2be25c9661 24568 libsbml_5.20.5+dfsg-2.debian.tar.xz > 20fc4e964a3e01fecb4499dd99465c74cf3c6e120b9e77f60bc352b28305cf6a 25180 libsbml_5.20.5+dfsg-2_source.buildinfo > Files: > 8b9f7b1b551fe85a0ab8a53b702e1693 2998 science optional libsbml_5.20.5+dfsg-2.dsc > bb83e95d560b68d360bb4430c8024939 24568 science optional libsbml_5.20.5+dfsg-2.debian.tar.xz > 595f8ee82d01d3fccbc44c85cfc3f81f 25180 science optional libsbml_5.20.5+dfsg-2_source.buildinfo > > -----BEGIN PGP SIGNATURE----- > > iQJGBAEBCgAwFiEEP0ZDkUmP6HS9tdmPISSqGYN4XJAFAmmI7BcSHHJhZmFlbEBk > ZWJpYW4ub3JnAAoJECEkqhmDeFyQygoP/joHopXrKZ5rZK951g9zm51cn0Stswqk > Vp377zw1qq7/T3JQ8YtfWq/zoFklZGwprfXr8DbtP7dmCLuEbx8Kljzo4rWlOYoB > kOMHi2P+L8Fp3DzA6Ht8iqyiyKOHDkJAhg6ecRTrJLrjVn+Z1r8ySgVbPvPeUoBZ > YtBCH+fhGs/RyVmKgYFKb6gr5nynLg90dVGvrZrZ3PX7WD2VCkr7j1aC9oGDtLKm > cb6EIYrQKXrP/TXskO1kAObhH+AYd36KDM/HSH0caFzzdLzjI2nSDiK7o8yWYPjw > 0raeqFOkh8veRItWNYCvMKVuHOAkiHEOPs9Y6ag1oi73DBw1lfo/QW1BjK4wc1gU > pL+pV71vovFN/Nmd8qefLgKke/BOiS8NeqyNLgzMXdFqLUMrI/9DimotbZl/oagh > duXcEDyJUlmXnaYxohcX5Huvh7lz5wAU0c7DV0G+bHX8m7uhkhcimQ63HeqxJtEB > 64G/dAJCfRI+CltJR2b8a29wLgBNr/pJu+UmpcTJaB3giWJtROkWhawqthw6mMl4 > Nx8QPqYaX+K6tbQhzXmPxoR57QSm9YkhHGdtfx0G4o6EptM6V2nffcXS3dvYeIEQ > NvIfrTHS/TbdDr12v9RYrkn0x1s/oJlS/B/9teke38tT2RJaVREIWJZ9OsPo/h02 > RSl9NDvEZRXf > =bne+ > -----END PGP SIGNATURE----- >