vpopmail+qmail+sqwebmail problem

I have the latest versions of qmail, vpopmail and sqwebmail running.

Once I set up the virtual domains, the mail that is in the user accounts in
those virtual domains doesn't seem to be accessible via sqwebmail.

If I try to log in with say [email protected] and a password, that fails.  If
I log in with user and password without a domain, it logs in, but does not
access the current emails in the account.

I can ssh to my server and then telnet to pop or imap and get to the
specific domain and log in and see the mail.  How do I get sqwebmail to see
those mails under each virtual domain?

Any help would be appreciated.