[fink:package-submissions] #4979 r-base34-3.4.1-1 update for 10.13 compatibility
Jack Howarth via Fink-tracker <[email protected]>
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Supplanted by https://sourceforge.net/p/fink/package-submissions/5021/ --- ** [package-submissions:#4979] r-base34-3.4.1-1 update for 10.13 compatibility** **Status:** open **Group:** Undergoing_Validation **Created:** Fri Aug 25, 2017 02:21 AM UTC by Jack Howarth **Last Updated:** Fri Aug 25, 2017 02:23 AM UTC **Owner:** BABA Yoshihiko The attached info file and patch file for r-base34-3.4.1-1 updates the package to the 3.4.1 upstream bugfix release and introduces the following fixes for building and use on 10.13... 1) Patch src/extra/intl/vasnprintf.c to handle the new format string strictness regarrding %n and dynamic format strings 2) pass 'ac_cv_have_decl_utimensat=no ac_cv_have_decl_clock_gettime=no' to avoid detection of new system call support which breaks the datetime.Rout testcase in the testsuite. Also to avoid failure in the reg-tests-1d.Rout testcase pass r_cv_working_mktime=no to confiigure. 3) Set and export TZ in the InfoTest to avoid https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17307 The info file changes are... ~~~ Index: r-base34.info =================================================================== RCS file: /cvsroot/fink/dists/10.9-libcxx/stable/main/finkinfo/sci/r-base34.info,v retrieving revision 1.2 diff -u -r1.2 r-base34.info --- r-base34.info 12 Aug 2017 07:13:21 -0000 1.2 +++ r-base34.info 25 Aug 2017 02:10:07 -0000 @@ -1,7 +1,7 @@ Info2: << Package: r-base34 -Version: 3.4.0 -Revision: 2 +Version: 3.4.1 +Revision: 1 Description: R Framework Maintainer: BABA Yoshihiko <[email protected]> Depends: << @@ -36,9 +36,9 @@ flag-sort (>= 0.5) << Source: http://cran.r-project.org/src/base/R-3/R-%v.tar.gz -Source-MD5: 75083c23d507b9c16d5c6afbd7a827e7 +Source-MD5: 3a79c01dc0527c62e80ffb1c489297ea PatchFile: %n.patch -PatchFile-MD5: a13b5b4ad615ef9bd5974834af2607f2 +PatchFile-MD5: 91322330a295078b120c1b2c8f2a4497 PatchScript: << #!/bin/sh -ev #sed 's|@PREFIX@|%p|g' < %{PatchFile} | patch -p1 @@ -73,7 +73,7 @@ --with-system-bzlib --with-system-pcre --with-system-zlib \ --with-x --x-includes=$X11_BASE_DIR/include --x-libraries=$X11_BASE_DIR/lib \ --with-tcl-config=%p/lib/tclConfig.sh --with-tk-config=%p/lib/tkConfig.sh \ - --without-internal-tzcode \ + --without-internal-tzcode r_cv_working_mktime=no ac_cv_have_decl_utimensat=no ac_cv_have_decl_clock_gettime=no \ CFLAGS="-g -O3" CXXFLAGS="-g -O3" FFLAGS="-g -O3" \ SED=/usr/bin/sed AWK=/usr/bin/awk GREP=/usr/bin/grep << @@ -98,7 +98,8 @@ #!/bin/sh -efv # don't leak from already-installed package unset R_HOME - + # set TZ to avoid https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17307 + export TZ=`date +%%Z` make -j1 -k check << << @@ -327,6 +328,14 @@ https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=15989 Prevent configure script from confusing 10.10 (Yosemite) with 10.1 (Puma). + +With format string strictness, High Sierra also enforces that +%n isn't used in dynamic format strings, but we should just +disable its use on darwin in general. + +Prevent configure script from detecting new support for utimensat and +clock_gettime to avoid datetime.Rout failing in testsuite. Likewise avoid +detecting working mktime to prevent failure in reg-tests-1d.Rout. << License: GPL Homepage: http://cran.R-project.org/ ~~~ Tested on 10.13 with 'fink -m' --- Sent from sourceforge.net because [email protected] is subscribed to https://sourceforge.net/p/fink/package-submissions/ To unsubscribe from further messages, a project admin can change settings at https://sourceforge.net/p/fink/admin/package-submissions/options. Or, if this is a mailing list, you can unsubscribe from the mailing list. ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot _______________________________________________ Fink-tracker mailing list [email protected] http://news.gmane.org/gmane.os.apple.fink.tracker