[fink:package-submissions] #5021 update r-base34 to 3.4.2 and patch for 10.13

- **labels**:  --> sci, Updated Version of Existing
- **status**: open --> closed-out-of-date
- **Group**: Undergoing_Validation -->  Supplanted
- **Comment**:

Moved to github
https://github.com/fink/fink-distributions/pull/12



---

** [package-submissions:#5021] update r-base34 to 3.4.2 and patch for 10.13**

**Status:** closed-out-of-date
**Group:**  Supplanted
**Labels:** sci Updated Version of Existing 
**Created:** Thu Sep 28, 2017 10:56 PM UTC by Jack Howarth
**Last Updated:** Thu Sep 28, 2017 10:58 PM UTC
**Owner:** BABA Yoshihiko


The following Info file changes updates the r-base34 package to the current 3.4.2 release updates the exostomg patch for 10.13 compatibility....

~~~
Index: r-base34.info
===================================================================
RCS file: /cvsroot/fink/dists/10.9-libcxx/stable/main/finkinfo/sci/r-base34.info,v
retrieving revision 1.2
diff -u -r1.2 r-base34.info
--- r-base34.info	12 Aug 2017 07:13:21 -0000	1.2
+++ r-base34.info	28 Sep 2017 22:55:21 -0000
@@ -1,7 +1,7 @@
 Info2: <<
 Package: r-base34
-Version: 3.4.0
-Revision: 2
+Version: 3.4.2
+Revision: 1
 Description: R Framework
 Maintainer:  BABA Yoshihiko <[email protected]>
 Depends: <<
@@ -36,9 +36,9 @@
 	flag-sort (>= 0.5)
 <<
 Source: http://cran.r-project.org/src/base/R-3/R-%v.tar.gz
-Source-MD5: 75083c23d507b9c16d5c6afbd7a827e7
+Source-MD5: 1cd6d37850188e7f190f1eb94a24ca1f
 PatchFile: %n.patch
-PatchFile-MD5: a13b5b4ad615ef9bd5974834af2607f2
+PatchFile-MD5: 91322330a295078b120c1b2c8f2a4497
 PatchScript: <<
   #!/bin/sh -ev
   #sed 's|@PREFIX@|%p|g' < %{PatchFile} | patch -p1
@@ -73,7 +73,7 @@
   --with-system-bzlib --with-system-pcre --with-system-zlib \
   --with-x --x-includes=$X11_BASE_DIR/include --x-libraries=$X11_BASE_DIR/lib \
   --with-tcl-config=%p/lib/tclConfig.sh --with-tk-config=%p/lib/tkConfig.sh \
-  --without-internal-tzcode \
+  --without-internal-tzcode r_cv_working_mktime=no ac_cv_have_decl_utimensat=no ac_cv_have_decl_clock_gettime=no \
   CFLAGS="-g -O3" CXXFLAGS="-g -O3" FFLAGS="-g -O3" \
   SED=/usr/bin/sed AWK=/usr/bin/awk GREP=/usr/bin/grep
 <<
@@ -98,7 +98,8 @@
   #!/bin/sh -efv
     # don't leak from already-installed package
     unset R_HOME
-
+    # set TZ to avoid https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17307
+    export TZ=`date +%%Z`
     make -j1 -k check
   <<
 <<
@@ -327,6 +328,14 @@
 https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=15989
 
 Prevent configure script from confusing 10.10 (Yosemite) with 10.1 (Puma).
+
+With format string strictness, High Sierra also enforces that
+%n isn't used in dynamic format strings, but we should just
+disable its use on darwin in general.
+
+Prevent configure script from detecting new support for utimensat and
+clock_gettime to avoid datetime.Rout failing in testsuite. Likewise avoid
+detecting working mktime to prevent failure in reg-tests-1d.Rout.
 <<
 License: GPL
 Homepage: http://cran.R-project.org/
~~~

Tested on 10.13 with 'fink -m'.


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