[fink:package-submissions] #4721 pytables-3.2.3

- **Group**: Awaiting_Dependency --> Awaiting_Update_from_Submitter
- **Comment**:

pytables-py27 fails with this error. py34 and py35 fail similarly
~~~
writing output... [ 77%] usersguide/introduction                                                                                                             
Exception occurred:
  File "/sw/lib/python2.7/site-packages/docutils/writers/_html_base.py", line 671, in depart_document
    assert not self.context, 'len(context) = %s' % len(self.context)
AssertionError: len(context) = 1
The full traceback has been saved in /private/tmp/sphinx-err-uiTE0E.log, if you want to report the issue to the developers.
~~~
This is the output from the error log cited:
~~~
$ sudo cat /private/tmp/sphinx-err-uiTE0E.log
Password:
# Sphinx version: 1.4.8
# Python version: 2.7.14 (CPython)
# Docutils version: 0.13.1 release
# Jinja2 version: 2.8
# Last messages:
#   writing output... [ 65%] release-notes/RELEASE_NOTES_v3.2.x
#   writing output... [ 66%] release_notes
#   writing output... [ 68%] usersguide/bibliography
#   writing output... [ 69%] usersguide/condition_syntax
#   writing output... [ 70%] usersguide/datatypes
#   writing output... [ 72%] usersguide/file_format
#   writing output... [ 73%] usersguide/filenode
#   writing output... [ 75%] usersguide/index
#   writing output... [ 76%] usersguide/installation
#   writing output... [ 77%] usersguide/introduction
# Loaded extensions:
#   sphinx.ext.graphviz (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/graphviz.pyc
#   sphinx.ext.autodoc (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/autodoc.pyc
#   sphinx.ext.inheritance_diagram (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/inheritance_diagram.pyc
#   sphinx.ext.extlinks (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/extlinks.pyc
#   sphinx.ext.doctest (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/doctest.pyc
#   numpydoc (unknown version) from /sw/build.build/pytables-py27-3.2.3.1-4/PyTables-v.3.2.3.1/doc/sphinxext/numpydoc.py
#   sphinx.ext.viewcode (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/viewcode.pyc
#   sphinx.ext.pngmath (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/pngmath.pyc
#   alabaster (0.7.9) from /sw/lib/python2.7/site-packages/alabaster/__init__.pyc
#   ipython_console_highlighting (unknown version) from /sw/build.build/pytables-py27-3.2.3.1-4/PyTables-v.3.2.3.1/doc/sphinxext/ipython_console_highlighting.py
#   sphinx.ext.autosummary (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/autosummary/__init__.pyc
#   sphinx.ext.todo (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/todo.pyc
Traceback (most recent call last):
  File "/sw/lib/python2.7/site-packages/sphinx/cmdline.py", line 244, in main
    app.build(opts.force_all, filenames)
  File "/sw/lib/python2.7/site-packages/sphinx/application.py", line 297, in build
    self.builder.build_update()
  File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 251, in build_update
    'out of date' % len(to_build))
  File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 322, in build
    self.write(docnames, list(updated_docnames), method)
  File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 360, in write
    self._write_serial(sorted(docnames), warnings)
  File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 368, in _write_serial
    self.write_doc(docname, doctree)
  File "/sw/lib/python2.7/site-packages/sphinx/builders/html.py", line 448, in write_doc
    self.docwriter.write(doctree, destination)
  File "/sw/lib/python2.7/site-packages/docutils/writers/__init__.py", line 80, in write
    self.translate()
  File "/sw/lib/python2.7/site-packages/sphinx/writers/html.py", line 47, in translate
    self.document.walkabout(visitor)
  File "/sw/lib/python2.7/site-packages/docutils/nodes.py", line 187, in walkabout
    visitor.dispatch_departure(self)
  File "/sw/lib/python2.7/site-packages/docutils/nodes.py", line 1895, in dispatch_departure
    return method(node)
  File "/sw/lib/python2.7/site-packages/docutils/writers/_html_base.py", line 671, in depart_document
    assert not self.context, 'len(context) = %s' % len(self.context)
AssertionError: len(context) = 1
~~~



---

** [package-submissions:#4721] pytables-3.2.3**

**Status:** open
**Group:** Awaiting_Update_from_Submitter
**Labels:** pythonmod Updated Version of Existing 
**Created:** Wed Jul 06, 2016 03:34 PM UTC by Derek Homeier
**Last Updated:** Tue Jul 12, 2016 12:32 PM UTC
**Owner:** nobody
**Attachments:**

- [pytables-py.info](https://sourceforge.net/p/fink/package-submissions/4721/attachment/pytables-py.info) (4.3 kB; application/octet-stream)
- [pytables-py35.ls](https://sourceforge.net/p/fink/package-submissions/4721/attachment/pytables-py35.ls) (29.1 kB; application/octet-stream)


Update to the latest upstream 3.2.3.1; built with -m under 10.10 and 10.11 for all three flavours. Note: the package does not support HDF5 v1.10 yet.


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