Integration of PVM into SGE 5.3
Co Thai Ngo <[email protected]> Thu, 16 Jun 2005 15:35:20 -0600
| Newsgroups | gmane.os.netbsd.devel.cluster,gmane.os.netbsd.current |
|---|---|
| Message-ID | <[email protected]> |
Hi, =20
=20
I'm trying to integrate PVM into SGE 5.3. But for some reasons, pvm is no=
t =20
started. Here is what I did: =20
- replaced SGE_ROOT/pvm with the supplied from SGE howto website =20
(http://gridengine.sunsource.net/howto/pvm-integration/pvm-integration.ht=
ml) =20
- Since NetBSD is not supported by PVM, I added the folloing line in to =
=20
SGE_ROOT/pvm/src/aimk =20
******** =20
case nbsd-i386: =20
case glinux: =20
case linux: =20
set CC =3D gcc =20
set CFLAGS =3D "-O -Wall -Werror -Wstrict-prototypes -DLINUX $DEBUG_FLAG =
=20
$CFLAGS" =20
set LFLAGS =3D "$DEBUG_FLAG $LFLAGS" =20
... =20
******* =20
- Defined PE: =20
******** =20
arbutus# qconf -mp pvm =20
pe_name pvm =20
queue_list all =20
slots 32 =20
user_lists NONE =20
xuser_lists NONE =20
start_proc_args /usr/pkg/sge/pvm/startpvm.sh $pe_hostfile =20
$host /usr/pkg/pvm3 =20
stop_proc_args /usr/pkg/sge/pvm/stoppvm.sh $pe_hostfile $host =20
allocation_rule 1 =20
control_slaves FALSE =20
job_is_first_task TRUE =20
=20
then I got the errors when I run the hello program: =20
********* =20
acacia: {36} more tester_loose.sh.pe481 =20
[pvmd pid25581] 06/16 14:21:08 readhostfile() iflist failed =20
startpvm: Couldn't get all of the 2 requested hosts =20
rm: /tmp/481.1.yucca.q/hostfile: No such file or directory =20
libpvm [pid27666] /tmp/pvmd.1024: No such file or directory =20
libpvm [pid27666] /tmp/pvmd.1024: No such file or directory =20
libpvm [pid27666]: pvm_halt(): Can't contact local daemon =20
******** =20
=20
****** =20
acacia: {37} more tester_loose.sh.po481 =20
/usr/pkg/sge/default/spool/yucca/active_jobs/481.1/pe_hostfile =20
yucca.nmsu.edu /usr/pkg/pvm3 =20
/var/tmp/tmp.0.00025581aa =20
startpvm.sh: startup failed - invoking cleanup script =20
/usr/pkg/sge/default/spool/yucca/active_jobs/481.1/pe_hostfile yucca.nmsu=
.edu =20
/usr/pkg/sge/default/spool/yucca/active_jobs/481.1/pe_hostfile yucca.nmsu=
.edu =20
/usr/pkg/sge/default/spool/oenothera/active_jobs/481.1/pe_hostfile =20
oenothera.nmsu.edu /usr/pkg/pvm3 =20
/var/tmp/tmp.0.00026663aa =20
********/ =20
=20
Does anyone know why pvm doesn't start. I've checked with SGE people and =
they =20
think the generated line "/var/tmp/tmp.0.00025581aa" shouldn't be there a=
nd =20
maybe PVM is compiled in a special way on NetBSD... But they seem not kno=
w how =20
to fix it. I highly appreciated if anyone could help me to fix that probl=
em. =20
Thank you very much, =20
=20
-- =20
Co Thai Ngo =20
Dept. of Biology =20
New Mexico State University =20