Re: Please review a number of R libraries

On Thu, Aug 30, 2012 at 10:11:37PM +0300, Mike M. Volokhov wrote:
> Could anybody take a look to the following packages, please.

Sure. Sorry for the delay.

> R-BiocGenerics	Generic functions for Bioconductor
> R-Rgraphviz	Plotting capabilities for R graph objects

configure: Using default directory /usr/local, consider specifiying --with-graphviz
configure: error: /usr/local/bin/dot not found.  Check Graphviz installation.

Probably needs to be given the path to graphviz.

> R-VGAM		Vector Generalized Linear and Additive Models

=> Bootstrap dependency digest>=20010302: found digest-20111104
=> Fetching VGAM_0.8-7.tar.gz
=> Total size: 2004921 bytes
ftp: Error retrieving file `404 Not Found'
fetch: Unable to fetch expected file VGAM_0.8-7.tar.gz


> R-biganalytics	Library of utilities for big.matrix objects of package bigmemory
> R-bigmemory	Manage massive matrices with shared memory and memory-mapped files
> R-bigtabulate	R table, tapply, and split-like functionality for (big.)matrix objects
> R-bnlearn	Bayesian network structure learning, parameter learning and inference

=> Fetching bnlearn_3.1.tar.gz
=> Total size: 1014087 bytes
ftp: Error retrieving file `404 Not Found'
fetch: Unable to fetch expected file bnlearn_3.1.tar.gz

> R-doParallel	Foreach parallel adaptor for the parallel package
> R-entropy	Entropy and Mutual Information Estimation
> R-foreach	Foreach looping construct for R
> R-gmp		Multiple Precision Arithmetic for R
> R-graph		R package to handle graph data structures
> R-gsl		R wrapper for the Gnu Scientific Library
> R-iterators	Iterator construct for R
> R-mclust	Model-based clustering and normal mixture modeling

WARNING: [license.mk] Every package should define a LICENSE.
=> Fetching mclust_3.4.8.tar.gz
=> Total size: 226824 bytes
ftp: Error retrieving file `404 Not Found'
fetch: Unable to fetch expected file mclust_3.4.8.tar.gz

The others seem to be fine.
Can you please fix the issues?

Thanks,
 Thomas

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