Re: problems with graphviz port and selfupdate

Have you tried recompiling everything after updating XCode? I've had  
some ports that would crap out and not compile correctly until XCode  
was updated and ports (including dependencies) reinstalled.

YMMV.



On Aug 29, 2006, at 1:48 AM, Lisa Friedland wrote:

>
> I normally try to avoid compiling at all costs, so please excuse  
> whatever I shouldn't have done along the way in this saga.  I'm  
> posting first to document the errors and solutions I've found  
> (being grateful to previous reporters), and second to ask for  
> suggestions about the current "Bus error".
>
> Everything's running on OS 10.4 PPC G4.
>
> 1) [Suggestion]
>
> I wanted to get a newer version of graphviz, so downloaded  
> darwinports to get it (v.2.8).  Running the programs (dot or neato)  
> from graphviz, I had the errors many people have seen (for instance  
> at http://www.graphviz.org/bugs/b891.html) when outputting certain  
> file types:
> "Error: fontconfig: Didn't find expected font family. Perhaps URW  
> Type 1 fonts need installing?"
>
> Distracted by those bug reports and workarounds, I had many false  
> starts before realizing the correct answer is actually to install  
> those URW Type 1 fonts.  Easiest way:
> port install urw-fonts
>
> In fact, I can't see why urw-fonts isn't listed as a dependency for  
> graphviz.  It needs to be installed first.
>
> 2) [Current issue, but probably a graphviz problem]
>
> Before passing step 1, I ended up with three different  
> installations of graphviz executables:
> an old version that comes with the Mac GUI, in /Applications/ 
> Graphviz.app/Contents/MacOS/
> a fink version in /sw/bin (which, if I remember right, had related  
> font errors and was an older version than in darwinports)
> the darwinports version in /opt/bin
> (and a local directory where I tried, but failed, to compile it  
> from source.)
>
> So when, after everything else was working I got a "Bus error" in  
> neato (the graphviz program I'm using), and saw something on the  
> web suggesting it could be from different versions getting linked  
> in together, I decided I'd better clean up everything.  I deleted  
> the fink version, took Graphviz.app out of my path, uninstalled all  
> packages in darwinports, and reinstalled them.
>
> Same problem: Bus error.
>
> Updating darwinports seemed like something to try.  But . . .
>
> 2) [Compile problem and solution]
>
> Running "port selfupdate", or downloading the source (DarwinPorts  
> 1.3.2) and trying to do the same, I first had a compile error about  
> TCL not being compiled with threads enabled.  I grabbed the  
> darwinports version of tcl tools, but these didn't have threads  
> enabled either.  To get around this, I found http:// 
> tcltkaqua.sourceforge.net/ and downloaded the current TclTkAqua  
> distribution (8.4.10).  It's precompiled and did turn out to have  
> threads enabled.  Hooray.
>
> (The darwinports .dmg's (v.1.2 and v.1.3) seemed to install fine,  
> but I imagine the problem would surface on a selfupdate.)
>
> 3) [Compile problem and hacked solution]
>
> Running "port selfupdate" or compiling darwinports from source,  
> this next error followed:
> ===> making all in src/pextlib1.0
> gcc -c -DUSE_TCL_STUBS -g -O2 -W -Wall -pedantic -g -Os - 
> DHAVE_CONFIG_H -I.. -I.  -I"/usr/include"  -DHAVE_UNISTD_H=1 - 
> DHAVE_LIMITS_H=1 -DTCL_WIDE_INT_TYPE=long\ long -DWORDS_BIGENDIAN=1  
> -DHAVE_GETCWD=1 -DHAVE_OPENDIR=1 -DHAVE_STRSTR=1 -DHAVE_STRTOL=1 - 
> DHAVE_STRTOLL=1 -DHAVE_STRTOULL=1 -DHAVE_TMPNAM=1 -DHAVE_WAITPID=1 - 
> DNO_VALUES_H=1 -DNO_DLFCN_H=1 -DHAVE_UNISTD_H=1 - 
> DHAVE_SYS_PARAM_H=1 -DUSE_TERMIOS=1 -DHAVE_SYS_TIME_H=1 - 
> DTIME_WITH_SYS_TIME=1 -DHAVE_TM_ZONE=1 -DHAVE_GMTIME_R=1 - 
> DHAVE_LOCALTIME_R=1 -DHAVE_TM_GMTOFF=1 -DHAVE_ST_BLKSIZE=1 - 
> DSTDC_HEADERS=1 -Dsocklen_t=unsigned -DHAVE_SIGNED_CHAR=1 - 
> DHAVE_PUTENV_THAT_COPIES=1 -DHAVE_SYS_IOCTL_H=1 - 
> DHAVE_SYS_FILIO_H=1  -fno-common Pextlib.c -o Pextlib.o
> In file included from Pextlib.c:96:
> /usr/include/sys/socket.h:99: error: two or more data types in  
> declaration specifiers
> make[2]: *** [Pextlib.o] Error 1
> make[1]: *** [all] Error 1
> make: *** [all] Error 1
>
> FYI, I updated XCode at this point (from 2.0 to 2.4), which neither  
> seems to have helped or hurt the matter.
>
> Poking around randomly, I came up with the following fix, which  
> solved it (but is probably not "the right" thing to do):
> In the file DarwinPorts-1.3.2/Mk/dports.autoconf.mk, edit the  
> TCL_DEFS in line 10.  Delete the flag "-Dsocklen_t=unsigned".  Then  
> rerun "make" from the top directory.
>
> ----
>
> Everything's dandy now except for that "bus error."  I'm  
> suspecting, since I've only seen it with unusually large files,  
> that it's actually a graphviz issue.  Unless anyone can think of a  
> way I could have multiple libraries mixed in together (or  
> something) at this point.
>
> Thanks.
> -Lisa
>
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