running interpro on cluster

Dear all,


Well, it looks like we've got Interpro running on the cluster with the 
Sun Grid Engine queuing system.


Steps needed to make this work (technical details):

1 - Allow job submission from all nodes (!)
2 - Update qstat_ipr.pl in the iprscan/bin directory (the patch from 
interpro should work, basically-you need to use the -f flag for qstat).
3 - Create a symbolic link to iprscan/conf/sge6.env under 
iprscan/conf/sge.env
3 - Change the following line in iprscan/sge6/conf

asyncsub=qsub -N [%jobid] [%optqueue] -shell n -b y -o /dev/null -e 
/dev/null [%env IPRSCAN_HOME]/conf/sge6-test.sh [%toolcmd]

To this:
asyncsub=qsub -N [%jobid] [%optqueue] -shell n -b y -o /dev/null -e 
/dev/null [%toolcmd]

Best regards,
Michael Gang
Evogene Bioinformatics

P.S. I would like to specially thank Mr. Powers for his great help