bio data mirroring
David Allouche <[email protected]> Mon, 14 Jan 2008 16:50:55 +0100
| Newsgroups | gmane.science.biology.informatics.clusters |
|---|---|
| Message-ID | <[email protected]> |
hi every body we strongly think that public data must be synchronize with a public software. so , ... with 2 others french academic lab, we develop a dedicate free ( gnu) software for large scale bio Data synchronization and post processing. the application is stable and used from several month by all 3 partners lab for synchronization and post-process various bio data bank. ( arround 100 workflow have been done ) data post-processing script are also available (in beta - test) for blast , srs , gcg , cdhit, emboss. after data transfert and data uncompressing. depending one script some post-process are compliant with remote execussion on pbs or sge. ( if you use data sharing between all cluster nodes with nfs ,or other cluster fs ) we are looking for more beta-test for feed back. ( publication is going to be submit very soon). the software is open , it's easy to integrate home made script. in near future -end of year-, we will provide a torrent release. if you are intressed , please let me know i ll send you url web site. regards david