Re: Parallel Sequence Alignment tool

Hi!

The parallel version of MUSCLE algorithm is available in this open-source
package: http://ugene.unipro.ru . You can also run it remotely any PC with
UGENE installed and configured to serve remote requests.

Note, that even not parallel (original) MUSCLE code can do large alignments
a LOT faster than Clustal and will produce comparable in quality results.

Mikhail.

On Fri, Jul 17, 2009 at 8:41 PM, <[email protected]> wrote:

> Does anyone have recommnedations for a parallel sequence alignment tool
>
> User investigation so far has turned up clustalW-MPI, but it seams to be
> using an older version of clustalW.
>
> Any imput much appreciated.
>
> Cheers
>
> Steve
>
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>



-- 
Mikhail Fursov