genefilter installation error
Subinoy Biswas <[email protected]> Fri, 22 Aug 2014 13:21:47 -0700
| Newsgroups | gmane.science.biology.informatics.conductor |
|---|---|
| Message-ID | <CAMMx3ywTZoPG+3ZG64+k0HT3ZPurCt55JO02AvdKitV+pte4vA@mail.gmail.com> |
Please help me I am getting error while installing genefilter package ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (AnnotationDbi) ERROR: dependency ‘XML’ is not available for package ‘annotate’ * removing ‘/home/subinoy/R/x86_64-pc-linux-gnu-library/3.1/annotate’ ERROR: dependency ‘annotate’ is not available for package ‘genefilter’ * removing ‘/home/subinoy/R/x86_64-pc-linux-gnu-library/3.1/genefilter’ The downloaded source packages are in ‘/tmp/RtmpFu8HQT/downloaded_packages’ Warning messages: 1: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : installation of package ‘XML’ had non-zero exit status 2: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : installation of package ‘annotate’ had non-zero exit status 3: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : installation of package ‘genefilter’ had non-zero exit status 4: installed directory not writable, cannot update packages 'codetools', 'MASS', 'spatial' > library(genefilter) Error in library(genefilter) : there is no package called ‘genefilter’ [[alternative HTML version deleted]] _______________________________________________ Bioconductor mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor