parallel BAM sorting with Rsamtools

"Jens Reeder [guest]" <[email protected]> Fri, 29 Aug 2014 10:32:34 -0700 (PDT)
Newsgroups gmane.science.biology.informatics.conductor
Message-ID <[email protected]>
Hi,

samtools now allows the sorting of bam files using several threads. This is incredibly useful for large BAM files, e.g. from whole-genome projects. 
Are there any plans of exposing the parallel sorting via Rsamtools' sortBam() and  asBam(..., indexDestination=TRUE)?

I couldn't find any mention of this in the mailing lists or elsewhere...

thanks
Jens

 -- output of sessionInfo(): 

.

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