DiffBind time course

Enrico Ferrero <[email protected]> Mon, 8 Sep 2014 12:01:57 +0100

Newsgroups	gmane.science.biology.informatics.conductor
Message-ID	<CAO22HXcAQM_61p7uH4KSKkM13yFn5G5hp7fZS32+cBGTNnpzDw@mail.gmail.com>

Hi,

Is there a way to use DiffBind to analyse time course data?
I have sample and control replicates at five different time points and
I would like to know which sites show differential binding over time.

At the moment I'm doing multiple pairwise comparisons (i.e: sample at
24h vs control at 24h) and I'm trying to understand if it's possible
at all and, if yes, what parameters I should pass to dba.contrast()
and dba.analyze().

Thanks!

-- 
Enrico Ferrero

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