Re: power calculation of RNA-Seq

Hi Yanzhu,
   The vignette (software manual) is distributed with the PROPER 
package. Examples with code are given for various situations in the 
vignette. Just type

vignette("PROPER")

in R (after you load the package) and it should open up the pdf file.

------------------------------------
Zhijin (Jean) Wu
Associate Professor of Biostatistics
Brown University, Box G-S121
Providence, RI  02912

Tel: 401 863 1230
Fax: 401 863 9182
http://www.stat.brown.edu/zwu

On 9/10/2014 9:21 AM, Yanzhu Lin wrote:
> Hi Dr. Wu,
>
> I am very interested in the package of power calculation of RNA-Seq data
> with factorial design mentioned in your post and I would like to try it. I
> have downloaded the package from the link you provided. But, I am not clear
> how to use it, could you give me an example about how to use it?
>
> Your help will be greatly appreciated.
>
>
>
> Best,
>
>
> Yanzhu
>
>
>
>
> On Tue, Jul 1, 2014 at 9:58 AM, Michael Love<[email protected]>
> wrote:
>
>> Let's keep the discussion on the list. This provides a searchable
>> archive for other Bioc users with similar questions.
>>
>> A google search for "bioconductor rna-seq power calculation" reveals:
>>
>> http://www.bioconductor.org/packages/release/bioc/html/RNASeqPower.html
>>
>>
>> On Tue, Jul 1, 2014 at 9:53 AM, Yanzhu Lin<[email protected]>  wrote:
>>>
>>> Hi Michael,
>>>
>>> Do you happenly know there is any package or paper works for power
>> calculation of factorial design of RNA-Seq project? Thanks.
>>>
>>>
>>> Best,
>>>
>>>
>>> Yanzhu
>>
>

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