The new COG database

Swati Pande <[email protected]>
Newsgroups gmane.science.biology.informatics.devel
Message-ID <[email protected]>
Has anyone worked with the new set of sequences in the COG database?
It seems that, unlike the old one, there is no direct way to download
sequences specific to a COG. On ftp, there is a file called whog which
contains information on each COG and a file called myva which is a
FASTA file containing all the proteins from the genomes in the new COG
db. In the old COG db, it was possible to download FASTA sequences for
each COG but I cant seem to find the same tool for the new set.
I can work around this, but I was just wondering if anyone knows of
anyway to do this faster?
thanks
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