Re: download bacterial genomes

A few whole-genome databases can be accessed from a single site:

   http://www.bio-mirror.net/

And they're a little more willing to accept regular connections.  If you're 
using Unix, the simplest approach is to run "wget" as a cron job.  "rsync" is a 
step up from that.  SRS may be worth looking into, too.  All of this can be 
found at the above site.

Jeff

ibtissem grissa wrote:
> 
> I want to download all bacterial genomes available (published and non 
> published) in fasta format in order to store them in a database,
> I want to cluster them (as actinobacteria, bacteroidetes,... ) 
> automatically.
> 
> Could someone please suggest me a web site where I can download all 
> these information easily (a simple perl program)? I Would really 
> appreciate it.
> 
> Thank you,
> -- 
> Ibtissem

-- 
J.W. Bizzaro
Bioinformatics Organization, Inc. (Bioinformatics.Org)
E-mail: [email protected]
Phone:  +1 508 890 8600
--