[dinosaur] Cassowary syrinx, hyoid and larynx + jawed vertebrate timetree + Late Triassic Bristol fissure + dino crabs
Ben Creisler <[email protected]> Fri, 27 Dec 2019 11:32:30 -0800
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--000000000000d1e398059ab48e83 Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: Quoted-printable Ben [email protected]=0A=0ASome recent non-dino papers that ma= y be of interest:=0A=0AFree pdf:=0A=0APhoebe L. McInerney, Michael S. Y. Le= e, Alice M. Clement & Trevor H. Worthy=0A(2019)=0AThe phylogenetic signific= ance of the morphology of the syrinx, hyoid and=0Alarynx, of the southern c= assowary, Casuarius casuarius (Aves,=0APalaeognathae).=0ABMC Evolutionary B= iology 19, Article number: 233=0Adoi: https://urldefense.proofpoint.com/v2= /url?u=3Dhttps-3A__doi.org_10.1186_s12862-2D019-2D1544-2D7&d=3DDwIFaQ&c=3Dc= lK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKH= n5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DjJSiZOi= t2yHpfsrgunw68mM24LV0taecI2N9PgSOMyw&e=3D=20=0Ahttps://urldefense.proofpoin= t.com/v2/url?u=3Dhttps-3A__bmcevolbiol.biomedcentral.com_articles_10.1186_s= 12862-2D019-2D1544-2D7&d=3DDwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CS= fnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7l= uXRVQinr2ZxWPoat1tOL0BjErSs&s=3DvPf0Sox29L2KD4kIFPJ93K7WTBVif__i0Z5CojyRUzg= &e=3D=20=0A=0AFree pdf:=0Ahttps://urldefense.proofpoint.com/v2/url?u=3Dhttp= s-3A__bmcevolbiol.biomedcentral.com_track_pdf_10.1186_s12862-2D019-2D1544-2= D7&d=3DDwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFa= UmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL= 0BjErSs&s=3DvpYgFoJBVbCGaUlb0TOJJNl6FUyfFunzzwg-6O4JRPM&e=3D=20=0A=0A=0ABac= kground=0A=0APalaeognathae is a basal clade within Aves and include the lar= ge and=0Aflightless ratites and the smaller, volant tinamous. Although much= research=0Ahas been conducted on various aspects of palaeognath morphology= , ecology,=0Aand evolutionary history, there are still areas which require= =0Ainvestigation. This study aimed to fill gaps in our knowledge of the=0AS= outhern Cassowary, Casuarius casuarius, for which information on the=0Askel= etal systems of the syrinx, hyoid and larynx is lacking - despite these=0As= tructures having been recognised as performing key functional roles=0Aassoc= iated with vocalisation, respiration and feeding. Previous research=0Ainto = the syrinx and hyoid have also indicated these structures to be=0Avaluable = for determining evolutionary relationships among neognath taxa,=0Aand thus = suggest they would also be informative for palaeognath=0Aphylogenetic analy= ses, which still exhibits strong conflict between=0Amorphological and molec= ular trees.=0A=0AResults=0A=0AThe morphology of the syrinx, hyoid and laryn= x of C. casuarius is described=0Afrom CT scans. The syrinx is of the simple= tracheo-bronchial syrinx type,=0Alacking specialised elements such as the = pessulus; the hyoid is relatively=0Ashort with longer ceratobranchials comp= ared to epibranchials; and the=0Alarynx is comprised of entirely cartilagin= ous, standard avian anatomical=0Aelements including a concave, basin-like c= ricoid and fused cricoid wings.=0AAs in the larynx, both the syrinx and hyo= id lack ossification and all three=0Astructures were most similar to Dromai= us. We documented substantial=0Avariation across palaeognaths in the skelet= al character states of the=0Asyrinx, hyoid, and larynx, using both the lite= rature and novel observations=0A(e.g. of C. casuarius). Notably, new synapo= morphies linking=0ADinornithiformes and Tinamidae are identified, consisten= t with the=0Amolecular evidence for this clade. These shared morphological = character=0Atraits include the ossification of the cricoid and arytenoid ca= rtilages,=0Aand an additional cranial character, the articulation between t= he maxillary=0Aprocess of the nasal and the maxilla.=0A=0AConclusion=0A=0AS= yrinx, hyoid and larynx characters of palaeognaths display greater=0Aconcor= dance with molecular trees than do other morphological traits. These=0Astru= ctures might therefore be less prone to homoplasy related to=0Aflightlessne= ss and gigantism, compared to typical morphological traits=0Aemphasised in = previous phylogenetic studies.=0A=0A=3D=3D=3D=3D=0A=0AFree pdf:=0A=0AGiovan= ni Mussini, David I. Whiteside, Claudia Hildebrandt & Michael J.=0ABenton (= 2019)=0AAnatomy of a Late Triassic Bristol fissure: Tytherington fissure 2.= =0AProceedings of the Geologists' Association (advance online publication)= =0Adoi: https://urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__doi.org_10.1= 016_j.pgeola.2019.12.001&d=3DDwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7= CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb= 7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DbXo_n_d_vDqdJBXEN1diV2TSbzqKLF5ancOzvNnqN= 3s&e=3D=20=0Ahttps://urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__www.sci= encedirect.com_science_article_abs_pii_S0016787819301415&d=3DDwIFaQ&c=3DclK= 7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5= g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DZxryTO024= JuXMSKcONs_EaP1obe7_aSTbr6P-q_9ARQ&e=3D=20=0A=0A=0AFree pdf:=0Ahttps://urld= efense.proofpoint.com/v2/url?u=3Dhttps-3A__cpb-2Deu-2Dw2.wpmucdn.com_blogs.= bristol.ac.uk_dist_6_525_files_2019_12_2020Mussini.pdf&d=3DDwIFaQ&c=3DclK7k= QUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4= z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DptBhhJiQTY6= UErksCdn-hW-xpLlOGWDzogHv0ToZTlo&e=3D=20=0A=0A=0A=0A=0AThe Late Triassic an= d Early Jurassic fissures around Bristol and South=0AWales are famous as so= urces of excellent fossils of early mammals,=0Adinosaurs, sphenodontians, a= nd other tetrapods. However, the ways in which=0Athese fissures filled with= sediment have not often been documented.=0AMoreover, systematic faunal sam= pling up a working face exposure has rarely=0Abeen attempted for the UK Tri= assic fissures. Here we show in detail how a=0Acomplex fissure in Tythering= ton Quarry, north-east of Bristol, filled in=0Amultiple steps, and document= both sedimentary facies and faunas.=0ATytherington Quarry is a key Late Tr= iassic Bristol sauropsid fissure site,=0Ahaving previously yielded abundant= Thecodontosaurus remains and a new genus=0Aof sphenodontian, Diphydontosau= rus. Our findings comprise specimens of=0Aterrestrial reptiles, including s= phenodontians and archosaurs. However,=0Aabundant remains of fishes and mar= ine invertebrates were also recovered,=0Aindicating a significant marine in= fluence during parts of the=0Afissure-filling process. Comparisons of our r= esults with those of previous=0Astudies on Tytherington and other Late Tria= ssic SW UK fissure sites=0Aindicate some consistent patterns of faunal asso= ciation and provide further=0Aevidence of a Rhaetian age for the Late Trias= sic palaeo-island fissures=0Anorth of Bristol. Our analysis supports a mode= l of fissure formation and=0Afilling entailing punctuated episodes of sedim= entation through a relatively=0Ashort time.=0A=0A=3D=3D=3D=0A=0AFree pdf:= =0A=0ADavid Marjanovic (2019)=0ARecalibrating the transcriptomic timetree o= f jawed vertebrates.=0AbioRxiv 2019.12.19.882829 (preprint)=0Adoi: https://= urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__doi.org_10.1101_2019.12.19.8= 82829&d=3DDwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4= IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1= tOL0BjErSs&s=3DDpnnioae3ACVDdKHQykBvv5bRA6ZSYzq1ZhiAtSVFKw&e=3D=20=0Ahttps:= //urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__www.biorxiv.org_content_10= .1101_2019.12.19.882829v1&d=3DDwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p= 7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybT= b7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3D-8ZmXOo2_qJNX6vUTi0zjUDVVhsO13oK_avYRJh0= FaA&e=3D=20=0A=0AFree pdf:=0Ahttps://urldefense.proofpoint.com/v2/url?u=3Dh= ttps-3A__www.biorxiv.org_content_10.1101_2019.12.19.882829v1.full.pdf&d=3DD= wIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl= 9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&= s=3DYzCGrOXVlmuUgAE9zldMgPr25sP-0uYR06U9RGDXDWo&e=3D=20=0A=0A=0AMolecular d= ivergence dating has the potential to overcome the=0Aincompleteness of the = fossil record in inferring when cladogenetic events=0A(splits, divergences)= happened, but needs to be calibrated by the fossil=0Arecord. Ideally but u= nrealistically, this would require practitioners to be=0Aspecialists in mol= ecular evolution, in the phylogeny and the fossil record=0Aof all sampled t= axa, and in the chronostratigraphy of the sites the fossils=0Awere found in= . Paleontologists have therefore tried to help by publishing=0Acompendia of= recommended calibrations, and molecular biologists unfamiliar=0Awith the f= ossil record have made heavy use of such works. Using a recent=0Aexample of= a large timetree inferred from molecular data, I demonstrate=0Athat calibr= ation dates cannot be taken from published compendia without=0Arisking stro= ng distortions to the results, because compendia become=0Aoutdated faster t= han they are published. The present work cannot serve as=0Asuch a compendiu= m either; in the slightly longer term, it can only=0Ahighlight known and ov= erlooked problems. Future authors will need to solve=0Aeach of these proble= ms anew through a thorough search of the primary=0Apaleobiological and chro= nostratigraphic literature on each calibration date=0Aevery time they infer= a new timetree; over 40% of the sources I cite were=0Apublished after mid-= 2016. Treating all calibrations as soft bounds results=0Ain younger nodes t= han treating all calibrations as hard bounds. The=0Aunexpected exception ar= e nodes calibrated with both minimum and maximum=0Aages, further demonstrat= ing the widely underestimated importance of maximum=0Aages in divergence da= ting.=0A=0A=0A=0A=3D=3D=3D=3D=3D=0A=3D=3D=3D=3D=3D=0A=0AAlso:=0A=0ANinon Ro= bin, Barry W. M. van Bakel, Mat=C3=BA=C5=A1 Hy=C5=BEn=C3=BD, Aude Cincotta,= G=C3=A9raldine=0AGarcia, Sylvain Charbonnier, Pascal Godefroit & Xavier Va= lentin (2019)=0AThe oldest freshwater crabs: claws on dinosaur bones.=0ASc= ientific Reports 9, Article number: 20220=0Adoi: https://urldefense.proofp= oint.com/v2/url?u=3Dhttps-3A__doi.org_10.1038_s41598-2D019-2D56180-2Dw&d=3D= DwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Y= l9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs= &s=3D-E2zjAlqr50gKvK3OI0wKmx3NH8NzuZUF3K1ej6mQYk&e=3D=20=0Ahttps://urldefen= se.proofpoint.com/v2/url?u=3Dhttps-3A__www.nature.com_articles_s41598-2D019= -2D56180-2Dw&d=3DDwIFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r= =3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr= 2ZxWPoat1tOL0BjErSs&s=3DYOrF4ATi0eD0_M0n42dCZK-3CacLbI64DMcBBSyjJls&e=3D=20= =0A=0AFree pdf:=0Ahttps://urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__ww= w.nature.com_articles_s41598-2D019-2D56180-2Dw.pdf&d=3DDwIFaQ&c=3DclK7kQUTW= tAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CY= JgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DLSMvLu2zAKfNEbW= txlzTh8jYooJm8ng7OJL7NmV86ec&e=3D=20=0A=0AWith approximately 1,500 extant s= pecies, freshwater crabs (Decapoda:=0ABrachyura) are among the most diverse= decapod crustaceans. Nevertheless,=0Atheir fossil record is extremely limi= ted: only Potamidae, Potamonautidae=0Aand Trichodactylidae are reported up = to the Eocene of the Neotropics so=0Afar. This work documents unusually lar= ge decapod claws from the Upper=0ACretaceous (Campanian) continental deposi= ts of Velaux and vicinity=0A(southern France), in close association with la= rge vertebrate remains. In=0Aaddition to (1) the systematic assignment of t= hese claws, the study=0Aaddresses (2) the salinity trends in the deposit en= vironment from its=0Afaunal assemblage and the elementary chemical patterns= of fossils, and (3)=0Athe likely scenario for their auto/allochthony in th= e Velaux fluvial=0Asystem. These claws belong to a new taxon, Dinocarcinus = velauciensis n.=0Agen. n. sp., referred to as Portunoidea sensu lato, a gro= up of "true" crabs=0Anowadays linked to marine systems. However, the faunal= assemblage, the claw=0Ataphonomy and the carbonates Y/Ho signatures suppor= t their ancient=0Afreshwater/terrestrial ecology, making them the oldest re= ported continental=0Abrachyurans and extending the presence of crabs in fre= shwater environments=0Aby 40 Ma. Either as primary or as secondary freshwat= er crabs, the=0Aoccurrence of these portunoids in Velaux is an evidence for= the independent=0Acolonizations of continental environments by multiple br= achyuran clades=0Aover time, as early as the Campanian.=0A= --000000000000d1e398059ab48e83 Content-Type: text/html; charset="UTF-8" Content-Transfer-Encoding: Quoted-printable <div dir=3D"ltr"><br><div>Ben Creisler</div><div><a href=3D"mailto:bcreisle= [email protected]">[email protected]</a></div><div><br></div><div>Some recent n= on-dino papers that may be of interest:</div><div><br></div><div>Free pdf:<= /div><div><br>Phoebe L. McInerney, Michael S. Y. Lee, Alice M. Clement &= ; Trevor H. Worthy (2019)<br>The phylogenetic significance of the morpholog= y of the syrinx, hyoid and larynx, of the southern cassowary, Casuarius cas= uarius (Aves, Palaeognathae).<br>BMC Evolutionary Biology 19, Article numbe= r: 233 <br>doi: =C2=A0<a href=3D"https://urldefense.proofpoint.com/v2/url?u= =3Dhttps-3A__doi.org_10.1186_s12862-2D019-2D1544-2D7&d=3DDwMFaQ&c= =3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9My= ZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs= &s=3DjJSiZOit2yHpfsrgunw68mM24LV0taecI2N9PgSOMyw&e=3D">https://doi.= org/10.1186/s12862-019-1544-7</a><br><a href=3D"https://urldefense.proofpoi= nt.com/v2/url?u=3Dhttps-3A__bmcevolbiol.biomedcentral.com_articles_10.1186_= s12862-2D019-2D1544-2D7&d=3DDwMFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHh= pN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m= =3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DvPf0Sox29L2KD4kIFPJ9= 3K7WTBVif__i0Z5CojyRUzg&e=3D">https://bmcevolbiol.biomedcentral.com/art= icles/10.1186/s12862-019-1544-7</a><br><br>Free pdf:<br><a href=3D"https://= urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__bmcevolbiol.biomedcentral.co= m_track_pdf_10.1186_s12862-2D019-2D1544-2D7&d=3DDwMFaQ&c=3DclK7kQUT= WtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g= 4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3Dvp= YgFoJBVbCGaUlb0TOJJNl6FUyfFunzzwg-6O4JRPM&e=3D">https://bmcevolbiol.bio= medcentral.com/track/pdf/10.1186/s12862-019-1544-7</a></div><div><br></div>= <div><br>Background</div><div><br>Palaeognathae is a basal clade within Ave= s and include the large and flightless ratites and the smaller, volant tina= mous. Although much research has been conducted on various aspects of palae= ognath morphology, ecology, and evolutionary history, there are still areas= which require investigation. This study aimed to fill gaps in our knowledg= e of the Southern Cassowary, Casuarius casuarius, for which information on = the skeletal systems of the syrinx, hyoid and larynx is lacking - despite t= hese structures having been recognised as performing key functional roles a= ssociated with vocalisation, respiration and feeding. Previous research int= o the syrinx and hyoid have also indicated these structures to be valuable = for determining evolutionary relationships among neognath taxa, and thus su= ggest they would also be informative for palaeognath phylogenetic analyses,= which still exhibits strong conflict between morphological and molecular t= rees.<br><br>Results</div><div><br>The morphology of the syrinx, hyoid and = larynx of C. casuarius is described from CT scans. The syrinx is of the sim= ple tracheo-bronchial syrinx type, lacking specialised elements such as the= pessulus; the hyoid is relatively short with longer ceratobranchials compa= red to epibranchials; and the larynx is comprised of entirely cartilaginous= , standard avian anatomical elements including a concave, basin-like cricoi= d and fused cricoid wings. As in the larynx, both the syrinx and hyoid lack= ossification and all three structures were most similar to Dromaius. We do= cumented substantial variation across palaeognaths in the skeletal characte= r states of the syrinx, hyoid, and larynx, using both the literature and no= vel observations (e.g. of C. casuarius). Notably, new synapomorphies linkin= g Dinornithiformes and Tinamidae are identified, consistent with the molecu= lar evidence for this clade. These shared morphological character traits in= clude the ossification of the cricoid and arytenoid cartilages, and an addi= tional cranial character, the articulation between the maxillary process of= the nasal and the maxilla.<br><br>Conclusion</div><div><br>Syrinx, hyoid a= nd larynx characters of palaeognaths display greater concordance with molec= ular trees than do other morphological traits. These structures might there= fore be less prone to homoplasy related to flightlessness and gigantism, co= mpared to typical morphological traits emphasised in previous phylogenetic = studies.<br></div><div><br></div><div>=3D=3D=3D=3D</div><div><br></div><div= >Free pdf:</div><div><br></div><div>Giovanni Mussini, David I. Whiteside, C= laudia Hildebrandt & Michael J. Benton (2019)<br>Anatomy of a Late Tria= ssic Bristol fissure: Tytherington fissure 2.<br>Proceedings of the Geologi= sts' Association (advance online publication)<br>doi: <a href=3D"https:= //urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__doi.org_10.1016_j.pgeola.2= 019.12.001&d=3DDwMFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_= gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGyb= Tb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DbXo_n_d_vDqdJBXEN1diV2TSbzqKLF5ancO= zvNnqN3s&e=3D" target=3D"_blank">https://doi.org/10.1016/j.pgeola.2019.= 12.001</a> <br><a href=3D"https://urldefense.proofpoint.com/v2/url?u=3Dhttp= s-3A__www.sciencedirect.com_science_article_abs_pii_S0016787819301415&d= =3DDwMFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO= 4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxW= Poat1tOL0BjErSs&s=3DZxryTO024JuXMSKcONs_EaP1obe7_aSTbr6P-q_9ARQ&e= =3D" target=3D"_blank">https://www.sciencedirect.com/science/article/abs/pi= i/S0016787819301415</a><br><br><br>Free pdf:<br><a href=3D"https://urldefen= se.proofpoint.com/v2/url?u=3Dhttps-3A__cpb-2Deu-2Dw2.wpmucdn.com_blogs.bris= tol.ac.uk_dist_6_525_files_2019_12_2020Mussini.pdf&d=3DDwMFaQ&c=3Dc= lK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgec= RCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&= ;s=3DptBhhJiQTY6UErksCdn-hW-xpLlOGWDzogHv0ToZTlo&e=3D">https://cpb-eu-w= 2.wpmucdn.com/blogs.bristol.ac.uk/dist/6/525/files/2019/12/2020Mussini.pdf<= /a>=C2=A0=C2=A0</div><div><br></div><div><br></div><div><br>The Late Triass= ic and Early Jurassic fissures around Bristol and South Wales are famous as= sources of excellent fossils of early mammals, dinosaurs, sphenodontians, = and other tetrapods. However, the ways in which these fissures filled with = sediment have not often been documented. Moreover, systematic faunal sampli= ng up a working face exposure has rarely been attempted for the UK Triassic= fissures. Here we show in detail how a complex fissure in Tytherington Qua= rry, north-east of Bristol, filled in multiple steps, and document both sed= imentary facies and faunas. Tytherington Quarry is a key Late Triassic Bris= tol sauropsid fissure site, having previously yielded abundant Thecodontosa= urus remains and a new genus of sphenodontian, Diphydontosaurus. Our findin= gs comprise specimens of terrestrial reptiles, including sphenodontians and= archosaurs. However, abundant remains of fishes and marine invertebrates w= ere also recovered, indicating a significant marine influence during parts = of the fissure-filling process. Comparisons of our results with those of pr= evious studies on Tytherington and other Late Triassic SW UK fissure sites = indicate some consistent patterns of faunal association and provide further= evidence of a Rhaetian age for the Late Triassic palaeo-island fissures no= rth of Bristol. Our analysis supports a model of fissure formation and fill= ing entailing punctuated episodes of sedimentation through a relatively sho= rt time.</div><div><br></div><div>=3D=3D=3D</div><div><br></div><div>Free p= df:</div><div><br>David Marjanovic (2019)<br>Recalibrating the transcriptom= ic timetree of jawed vertebrates.<br>bioRxiv 2019.12.19.882829 (preprint) <= br>doi: <a href=3D"https://urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__d= oi.org_10.1101_2019.12.19.882829&d=3DDwMFaQ&c=3DclK7kQUTWtAVEOVIgvi= 0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9S= I&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3DDpnnioae3ACVD= dKHQykBvv5bRA6ZSYzq1ZhiAtSVFKw&e=3D">https://doi.org/10.1101/2019.12.19= .882829</a><br><a href=3D"https://urldefense.proofpoint.com/v2/url?u=3Dhttp= s-3A__www.biorxiv.org_content_10.1101_2019.12.19.882829v1&d=3DDwMFaQ&am= p;c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl= 9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjE= rSs&s=3D-8ZmXOo2_qJNX6vUTi0zjUDVVhsO13oK_avYRJh0FaA&e=3D">https://w= ww.biorxiv.org/content/10.1101/2019.12.19.882829v1</a></div><div><br></div>= <div>Free pdf:</div><div><a href=3D"https://urldefense.proofpoint.com/v2/ur= l?u=3Dhttps-3A__www.biorxiv.org_content_10.1101_2019.12.19.882829v1.full.pd= f&d=3DDwMFaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r= =3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRV= Qinr2ZxWPoat1tOL0BjErSs&s=3DYzCGrOXVlmuUgAE9zldMgPr25sP-0uYR06U9RGDXDWo= &e=3D">https://www.biorxiv.org/content/10.1101/2019.12.19.882829v1.full= .pdf</a><br></div><div><br></div><div>=C2=A0<br></div><div>Molecular diverg= ence dating has the potential to overcome the incompleteness of the fossil = record in inferring when cladogenetic events (splits, divergences) happened= , but needs to be calibrated by the fossil record. Ideally but unrealistica= lly, this would require practitioners to be specialists in molecular evolut= ion, in the phylogeny and the fossil record of all sampled taxa, and in the= chronostratigraphy of the sites the fossils were found in. Paleontologists= have therefore tried to help by publishing compendia of recommended calibr= ations, and molecular biologists unfamiliar with the fossil record have mad= e heavy use of such works. Using a recent example of a large timetree infer= red from molecular data, I demonstrate that calibration dates cannot be tak= en from published compendia without risking strong distortions to the resul= ts, because compendia become outdated faster than they are published. The p= resent work cannot serve as such a compendium either; in the slightly longe= r term, it can only highlight known and overlooked problems. Future authors= will need to solve each of these problems anew through a thorough search o= f the primary paleobiological and chronostratigraphic literature on each ca= libration date every time they infer a new timetree; over 40% of the source= s I cite were published after mid-2016. Treating all calibrations as soft b= ounds results in younger nodes than treating all calibrations as hard bound= s. The unexpected exception are nodes calibrated with both minimum and maxi= mum ages, further demonstrating the widely underestimated importance of max= imum ages in divergence dating.<br><br><br></div><div><br>=3D=3D=3D=3D=3D<b= r></div><div>=3D=3D=3D=3D=3D</div><div><br></div><div>Also:</div><div><br><= /div><div>Ninon Robin, Barry W. M. van Bakel, Mat=C3=BA=C5=A1 Hy=C5=BEn=C3= =BD, Aude Cincotta, G=C3=A9raldine Garcia, Sylvain Charbonnier, Pascal Gode= froit & Xavier Valentin =C2=A0(2019)<br>The oldest freshwater crabs: cl= aws on dinosaur bones.<br>Scientific Reports =C2=A09, Article number: 20220= <br>doi: <a href=3D"https://urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__= doi.org_10.1038_s41598-2D019-2D56180-2Dw&d=3DDwMFaQ&c=3DclK7kQUTWtA= VEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCKHn5g4z1= CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s=3D-E2zj= Alqr50gKvK3OI0wKmx3NH8NzuZUF3K1ej6mQYk&e=3D">https://doi.org/10.1038/s4= 1598-019-56180-w</a><br><a href=3D"https://urldefense.proofpoint.com/v2/url= ?u=3Dhttps-3A__www.nature.com_articles_s41598-2D019-2D56180-2Dw&d=3DDwM= FaQ&c=3DclK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUm= Gof_Yl9MyZgecRCKHn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1t= OL0BjErSs&s=3DYOrF4ATi0eD0_M0n42dCZK-3CacLbI64DMcBBSyjJls&e=3D">htt= ps://www.nature.com/articles/s41598-019-56180-w</a></div><div><br>Free pdf:= <br><a href=3D"https://urldefense.proofpoint.com/v2/url?u=3Dhttps-3A__www.n= ature.com_articles_s41598-2D019-2D56180-2Dw.pdf&d=3DDwMFaQ&c=3DclK7= kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=3DRy_mO4IFaUmGof_Yl9MyZgecRCK= Hn5g4z1CYJgFW9SI&m=3DnqWyZuGTuGybTb7luXRVQinr2ZxWPoat1tOL0BjErSs&s= =3DLSMvLu2zAKfNEbWtxlzTh8jYooJm8ng7OJL7NmV86ec&e=3D">https://www.nature= .com/articles/s41598-019-56180-w.pdf</a><br><br>With approximately 1,500 ex= tant species, freshwater crabs (Decapoda: Brachyura) are among the most div= erse decapod crustaceans. Nevertheless, their fossil record is extremely li= mited: only Potamidae, Potamonautidae and Trichodactylidae are reported up = to the Eocene of the Neotropics so far. This work documents unusually large= decapod claws from the Upper Cretaceous (Campanian) continental deposits o= f Velaux and vicinity (southern France), in close association with large ve= rtebrate remains. In addition to (1) the systematic assignment of these cla= ws, the study addresses (2) the salinity trends in the deposit environment = from its faunal assemblage and the elementary chemical patterns of fossils,= and (3) the likely scenario for their auto/allochthony in the Velaux fluvi= al system. These claws belong to a new taxon, Dinocarcinus velauciensis n. = gen. n. sp., referred to as Portunoidea sensu lato, a group of "true&q= uot; crabs nowadays linked to marine systems. However, the faunal assemblag= e, the claw taphonomy and the carbonates Y/Ho signatures support their anci= ent freshwater/terrestrial ecology, making them the oldest reported contine= ntal brachyurans and extending the presence of crabs in freshwater environm= ents by 40=E2=80=89Ma. Either as primary or as secondary freshwater crabs, = the occurrence of these portunoids in Velaux is an evidence for the indepen= dent colonizations of continental environments by multiple brachyuran clade= s over time, as early as the Campanian.<br></div></div>=0A= --000000000000d1e398059ab48e83--