"header" from Markdown file auto-TOC appearing in the navigation panel, in weird places

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Hi ! I'll be starting with a disclaimer : I'm using Doxygen in a weird way
(at least I think)
I am turning some json files into nice markdown files and then use Doxygen
to generate the html from those md files (there's a lot of them)
The problem I'm running into is that for some reason, some "header" (tagged
with "##" for example) links end up in my navigation panel, in weird places
too
The markdown source doesn't seem to have weird references etc, neither in
the files where the headers show or the files the headers point to
Many of my filenames have underscores in them. Could that be a problem ?
Here's two images to help describe what I'm doing and what goes wrong :
https://i.imgur.com/ihIlTZW.png <- This is a typical generated page, with
some information and headers, especially the "Properties" one
https://i.imgur.com/vKeOE3j.png <- This image shows what's wrong, I've
scrolled to somewhere else in my navigation panel and there's a lot of
"Properties" that all link to different files, but all of them are from the
same directory
Here's the source
<https://drive.google.com/file/d/1nDW77ngHcWvAKpRdkqdgsYr1U00Tr5hp/view>
And produced html/js code
<https://drive.google.com/file/d/1n6sXS3L07XIW9Zu-25XA3lFXwoYqP5fN/view>
I hope someone can help me :)

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<div dir=3D"ltr">Hi ! I&#39;ll be starting with a disclaimer : I&#39;m usin=
g Doxygen in a weird way (at least I think)<br>I am turning some json files=
 into nice markdown files and then use Doxygen to generate the html from th=
ose md files (there&#39;s a lot of them)<br>The problem I&#39;m running int=
o is that for some reason, some &quot;header&quot; (tagged with &quot;##&qu=
ot; for example) links end up in my navigation panel, in weird places too<b=
r>The markdown source doesn&#39;t seem to have weird references etc, neithe=
r in the files where the headers show or the files the headers point to<br>=
Many of my filenames have underscores in them. Could that be a problem ?<br=
>Here&#39;s two images to=C2=A0help describe what I&#39;m doing and what go=
es wrong :<br><a href=3D"https://i.imgur.com/ihIlTZW.png" target=3D"_blank"=
>https://i.imgur.com/ihIlTZW.png</a>=C2=A0&lt;- This is a typical generated=
 page, with some information and headers, especially the &quot;Properties&q=
uot; one<br><a href=3D"https://i.imgur.com/vKeOE3j.png" target=3D"_blank">h=
ttps://i.imgur.com/vKeOE3j.png</a>=C2=A0&lt;- This image shows what&#39;s=
=C2=A0wrong, I&#39;ve scrolled to somewhere else in my navigation panel and=
 there&#39;s a lot of &quot;Properties&quot; that all link to different fil=
es, but all of them are from the same directory<br>Here&#39;s the=C2=A0<a h=
ref=3D"https://drive.google.com/file/d/1nDW77ngHcWvAKpRdkqdgsYr1U00Tr5hp/vi=
ew">source</a>

<br>And produced html/js=C2=A0<a href=3D"https://drive.google.com/file/d/1n=
6sXS3L07XIW9Zu-25XA3lFXwoYqP5fN/view">code</a><br>I hope someone can help m=
e :)=C2=A0=C2=A0<br></div><div id=3D"DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2">=
<br> <table style=3D"border-top:1px solid #d3d4de">
	<tr>
      <td style=3D"width:55px;padding-top:18px"><a href=3D"https://www.avas=
t.com/sig-email?utm_medium=3Demail&amp;utm_source=3Dlink&amp;utm_campaign=
=3Dsig-email&amp;utm_content=3Dwebmail" target=3D"_blank"><img src=3D"https=
://ipmcdn.avast.com/images/icons/icon-envelope-tick-round-orange-animated-n=
o-repeat-v1.gif" alt=3D"" width=3D"46" height=3D"29" style=3D"width: 46px; =
height: 29px;"></a></td>
		<td style=3D"width:470px;padding-top:17px;color:#41424e;font-size:13px;fo=
nt-family:Arial,Helvetica,sans-serif;line-height:18px">Garanti sans virus. =
<a href=3D"https://www.avast.com/sig-email?utm_medium=3Demail&amp;utm_sourc=
e=3Dlink&amp;utm_campaign=3Dsig-email&amp;utm_content=3Dwebmail" target=3D"=
_blank" style=3D"color:#4453ea">www.avast.com</a> 		</td>
	</tr>
</table>
<a href=3D"#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2" width=3D"1" height=3D"1">=
</a></div>

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