gmane.comp.java.bio.general archive

1306 archived articles, newest first (page 1 of 14). Latest articles →

Re: NullPointerException with toMMCIF method
Tue, 14 Apr 2026 09:01:37 +0200
Enrico Morelli <[email protected]> • #5219
Re: NullPointerException with toMMCIF method
Mon, 13 Apr 2026 09:31:17 -0700
Jose Duarte <[email protected]> • #5218
NullPointerException with toMMCIF method
Mon, 13 Apr 2026 16:28:36 +0200
Enrico Morelli <[email protected]> • #5217
Re: Alternative conformation skipped
Mon, 19 May 2025 13:43:22 -0700
Jose Duarte <[email protected]> • #5216
Re: Alternative conformation skipped
Thu, 8 May 2025 15:06:11 +0200
Enrico Morelli <[email protected]> • #5215
Re: Alternative conformation skipped
Wed, 7 May 2025 11:29:03 -0700
Jose Duarte <[email protected]> • #5214
Alternative conformation skipped
Wed, 7 May 2025 12:31:49 +0200
Enrico Morelli <[email protected]> • #5213
Re: How to find Pubmed ID
Wed, 29 May 2024 10:22:44 -0700
Jose Duarte <[email protected]> • #5212
Re: How to find Pubmed ID
Wed, 29 May 2024 11:48:38 +0200
Enrico Morelli <[email protected]> • #5211
Re: How to find Pubmed ID
Tue, 28 May 2024 10:36:12 -0700
Jose Duarte <[email protected]> • #5210
How to find Pubmed ID
Mon, 27 May 2024 16:30:26 +0200
Enrico Morelli <[email protected]> • #5209
Re: Updating the Cookbook (Resend)
Wed, 17 Jan 2024 07:49:24 -0600
Gary Murphy <[email protected]> • #5208
Re: Updating the Cookbook (Resend)
Tue, 16 Jan 2024 11:01:06 -0800
Jose Duarte <[email protected]> • #5207
Re: Updating the Cookbook (Resend)
Mon, 15 Jan 2024 10:39:37 -0600
Gary Murphy <[email protected]> • #5206
Re: Updating the Cookbook (Resend)
Mon, 15 Jan 2024 15:49:52 +0000
Peter Cock <[email protected]> • #5205
Updating the Cookbook (Resend)
Mon, 15 Jan 2024 08:53:08 -0600
Gary Murphy <[email protected]> • #5204
Re: Atom neighbors
Tue, 12 Dec 2023 09:44:55 -0800
Jose Duarte <[email protected]> • #5203
Atom neighbors
Tue, 12 Dec 2023 16:03:18 +0100
Enrico Morelli <[email protected]> • #5202
Re: Avoid PDB folder structure creation
Thu, 7 Dec 2023 08:57:47 -0800
Jose Duarte <[email protected]> • #5201
Avoid PDB folder structure creation
Wed, 6 Dec 2023 15:21:52 +0100
Enrico Morelli <[email protected]> • #5200
Re: Chain order
Wed, 18 Oct 2023 12:12:04 +0200
Enrico Morelli <[email protected]> • #5199
Re: Chain order
Fri, 13 Oct 2023 13:01:05 +0200
Enrico Morelli <[email protected]> • #5198
Re: Chain order
Fri, 13 Oct 2023 09:51:30 +0000
#AMR ALI MOKHTAR ALHOSSARY# <[email protected]> • #5197
Re: Chain order
Fri, 13 Oct 2023 10:16:14 +0200
Enrico Morelli <[email protected]> • #5196
Re: Chain order
Thu, 12 Oct 2023 20:48:40 -0700
Jose Duarte <[email protected]> • #5195
Chain order
Thu, 12 Oct 2023 17:06:52 +0200
Enrico Morelli <[email protected]> • #5194
Re: DNS changes for Bio*.org domains
Fri, 3 Mar 2023 16:34:58 +0000
Peter Cock <[email protected]> • #5193
DNS changes for Bio*.org domains
Thu, 23 Feb 2023 19:47:48 +0000
Peter Cock <[email protected]> • #5192
Re: Regarding in issue on the openchart not found in biojava 6.0.4
Mon, 24 Jan 2022 13:26:54 +0100
Francisco José Peñarrubia <[email protected]> • #5191
Re: Regarding in issue on the openchart not found in biojava 6.0.4
Mon, 24 Jan 2022 17:11:32 +0545
Nadeem Shakya <[email protected]> • #5190
Re: Regarding in issue on the openchart not found in biojava 6.0.4
Mon, 24 Jan 2022 11:09:06 +0100
Francisco José Peñarrubia <[email protected]> • #5189
Re: Regarding in issue on the openchart not found in biojava 6.0.4
Mon, 24 Jan 2022 09:41:47 +0545
Nadeem Shakya <[email protected]> • #5188
Re: Regarding in issue on the openchart not found in biojava 6.0.4
Fri, 21 Jan 2022 22:09:18 -0800
Jose Duarte <[email protected]> • #5187
Regarding in issue on the openchart not found in biojava 6.0.4
Sat, 22 Jan 2022 11:43:31 +0545
Roshan Shrestha <[email protected]> • #5186
Re: Query: Regarding Log4Shell Patch Updates In Biojava
Wed, 5 Jan 2022 12:00:04 +0545
Nadeem Shakya <[email protected]> • #5185
Re: Query: Regarding Log4Shell Patch Updates In Biojava
Tue, 4 Jan 2022 21:42:35 -0800
Jose Duarte <[email protected]> • #5184
Query: Regarding Log4Shell Patch Updates In Biojava
Wed, 5 Jan 2022 10:26:30 +0545
Nadeem Shakya <[email protected]> • #5183
Re: Status of the project?
Thu, 15 Jul 2021 14:24:11 -0700
Jose Duarte <[email protected]> • #5182
Re: Status of the project?
Sun, 11 Jul 2021 19:23:05 -0500
Michael Heuer <[email protected]> • #5181
Status of the project?
Mon, 12 Jul 2021 01:13:49 +0100
Richard Adams <[email protected]> • #5180
Odp: Re: Possibility to contribute to biojava project
Wed, 15 Jul 2020 17:08:44 +0200
smola11 <[email protected]> • #5179
JavaPrimer3
Wed, 15 Jul 2020 02:49:59 +0000
"Fred Long" <[email protected]> • #5178
Re: Possibility to contribute to biojava project
Mon, 13 Jul 2020 11:19:43 +0200
Spencer Bliven <[email protected]> • #5177
Re: Possibility to contribute to biojava project
Sun, 12 Jul 2020 22:53:06 +0100
Peter Cock <[email protected]> • #5176
Possibility to contribute to biojava projec t
Wed, 08 Jul 2020 16:50:41 +0200
smola11 <[email protected]> • #5175
Book about Biojava
Thu, 6 Feb 2020 19:27:51 -0400
Albert França Josuá Costa <[email protected]> • #5174
renaming IDs in a GFF3 file
Thu, 23 Jan 2020 20:37:18 +1000
Mic <[email protected]> • #5173
OBF Code of Conduct
Tue, 19 Nov 2019 14:45:45 -0800
Jose Duarte <[email protected]> • #5172
Re: ProtParam
Mon, 28 Oct 2019 12:20:35 -0700
Mark Fortner <[email protected]> • #5171
ProtParam
Thu, 24 Oct 2019 14:15:32 -0700
Mark Fortner <[email protected]> • #5170
Re: Poll: is biojava a framework or library?
Wed, 12 Dec 2018 07:29:29 -0600
Brian Repko <[email protected]> • #5169
Re: Poll: is biojava a framework or library?
Wed, 12 Dec 2018 00:56:41 +0100 (CET)
Ben Stöver <[email protected]> • #5168
Re: Poll: is biojava a framework or library?
Tue, 11 Dec 2018 16:16:05 -0700
Sam Hokin <[email protected]> • #5167
Poll: is biojava a framework or library?
Tue, 11 Dec 2018 21:03:28 +0100
Spencer Bliven <[email protected]> • #5166
BioJava in Jupyter Notebook
Mon, 26 Nov 2018 22:26:24 -0800
Peter Rose <[email protected]> • #5165
Journal article about BioJava library
Wed, 5 Sep 2018 20:19:42 +0100
Aleix Lafita <[email protected]> • #5164
Journal article about BioJava library
Wed, 5 Sep 2018 20:15:27 +0100
Aleix Lafita <[email protected]> • #5163
Re: blast parser
Fri, 25 May 2018 11:00:21 -0700
Jose Duarte <[email protected]> • #5162
blast parser
Fri, 25 May 2018 12:40:11 -0400
"Carlos M. Martínez Ortiz" <[email protected]> • #5161
Re: Help with building BioJava using Maven?
Wed, 23 May 2018 13:36:42 -0700
Jose Duarte <[email protected]> • #5160
Help with building BioJava using Maven?
Wed, 23 May 2018 12:26:39 -0700
Caitlin <[email protected]> • #5159
BioJava 5.0.0 released
Fri, 6 Apr 2018 16:33:53 -0700
Jose Duarte <[email protected]> • #5158
Last chance to apply by April 8: Scalable and Reproducible Structural Bioinformatics Workshop & Hackathon 2018
Fri, 6 Apr 2018 12:08:16 -0700
Peter Rose <[email protected]> • #5157
[ANNOUNCE] Biojava (biojava-legacy) version 1.9.3 released
Fri, 23 Mar 2018 09:50:41 -0500
Michael Heuer <[email protected]> • #5156
Scalable and Reproducible Structural Bioinformatics Workshop & Hackathon 2018
Wed, 21 Mar 2018 10:12:27 -0700
Peter Rose <[email protected]> • #5155
Scalable and Reproducible Structural Bioinformatics Workshop & Hackathon 2018
Fri, 2 Mar 2018 11:26:07 -0800
Peter Rose <[email protected]> • #5154
Re: Merging biojava-dev & Biojava-l mailing lists
Thu, 18 Jan 2018 08:14:53 -0800
Jose Duarte <[email protected]> • #5153
Merging biojava-dev & Biojava-l mailing lists
Thu, 18 Jan 2018 11:40:58 +0000
Peter Cock <[email protected]> • #5152
Re: OBF mailman server problems - BioJava mailing lists?
Wed, 27 Dec 2017 23:37:53 +0000
Peter Cock <[email protected]> • #5151
Re: OBF mailman server problems - BioJava mailing lists?
Wed, 27 Dec 2017 14:09:14 -0600
Michael Heuer <[email protected]> • #5150
OBF mailman server problems - BioJava mailing lists?
Wed, 13 Dec 2017 16:49:42 +0000
Peter Cock <[email protected]> • #5149
[Job] Software Engineer (Protein Design, Structural Bioinformatics) at DNASTAR
Wed, 23 Aug 2017 22:19:49 +0000
Steve Darnell <[email protected]> • #5148
Re: Issue with FASTA reader
Fri, 7 Jul 2017 16:32:09 -0700
Jose Duarte <[email protected]> • #5147
Re: Issue with FASTA reader
Fri, 7 Jul 2017 23:27:23 +0000
"Rojnuckarin, Dak" <[email protected]> • #5146
Re: Issue with FASTA reader
Thu, 1 Jun 2017 09:36:52 -0500
Jose Duarte <[email protected]> • #5145
Re: Issue with FASTA reader
Thu, 1 Jun 2017 13:25:51 +0000
"Rojnuckarin, Dak" <[email protected]> • #5144
Re: Disable WARN message
Tue, 16 May 2017 11:32:11 +0200
Enrico Morelli <[email protected]> • #5143
Re: Disable WARN message
Mon, 15 May 2017 18:39:09 -0700
Jose Duarte <[email protected]> • #5142
Disable WARN message
Mon, 15 May 2017 15:18:17 +0200
Enrico Morelli <[email protected]> • #5141
Re: Access chain letter and residue number from Atom object
Fri, 12 May 2017 07:12:35 -0700
Jose Duarte <[email protected]> • #5140
Access chain letter and residue number from Atom object
Fri, 12 May 2017 12:07:48 +0200
Enrico Morelli <[email protected]> • #5139
Project Leadership
Thu, 11 May 2017 10:47:01 -0700
Andreas Prlic <[email protected]> • #5138
Structural Bioinformatics Training Workshop & Hackathon 2017 - Application of Big Data Technology and 3D Visualization
Tue, 25 Apr 2017 15:05:31 -0700
Peter Rose <[email protected]> • #5137
Re: Issue with FASTA reader
Wed, 19 Apr 2017 13:34:29 -0700
Andreas Prlic <[email protected]> • #5136
Issue with FASTA reader
Mon, 17 Apr 2017 16:43:14 +0000
"Rojnuckarin, Dak" <[email protected]> • #5135
Structural Bioinformatics Training Workshop & Hackathon 2017 - Application of Big Data Technology and 3D Visualization
Wed, 5 Apr 2017 08:36:12 -0700
Peter Rose <[email protected]> • #5134
PostDoc opportunities at RCSB PDB
Thu, 9 Mar 2017 10:56:09 -0800
Andreas Prlic <[email protected]> • #5133
Re: java.lang.ExceptionInInitializerError in protein disorder module, JRonn
Thu, 2 Mar 2017 16:19:56 +0400
Srikanth Bezawada <[email protected]> • #5132
java.lang.ExceptionInInitializerError in protein disorder module, JRonn
Thu, 2 Mar 2017 01:18:11 +0400
Srikanth Bezawada <[email protected]> • #5131
[Job] Postdoc Structural Bioinformatics/Big Data at UC San Diego
Tue, 7 Feb 2017 18:06:22 +0000
"Rose, Peter" <[email protected]> • #5130
Re: Parsing embl format with biojava4
Wed, 28 Dec 2016 10:49:20 -0600
Michael Heuer <[email protected]> • #5129
Re: Parsing embl format with biojava4
Wed, 28 Dec 2016 16:46:08 +0000
Dario Beraldi <[email protected]> • #5128
Re: Parsing embl format with biojava4
Wed, 28 Dec 2016 09:45:13 -0600
Michael Heuer <[email protected]> • #5127
Parsing embl format with biojava4
Wed, 28 Dec 2016 09:30:54 +0000
Dario Beraldi <[email protected]> • #5126
Re: Help on Project Biojava
Mon, 5 Dec 2016 16:06:37 +0100
Spencer Bliven <[email protected]> • #5125
Re: Help on Project Biojava
Mon, 21 Nov 2016 12:10:44 +0100
Spencer Bliven <[email protected]> • #5124
Re: Help on Project Biojava
Fri, 18 Nov 2016 14:48:14 +0000
bio12058 <[email protected]> • #5123
Re: Help on Project Biojava
Tue, 8 Nov 2016 18:19:25 +0100
Spencer Bliven <[email protected]> • #5122
Re: Help on Project Biojava
Mon, 07 Nov 2016 11:23:39 +0000
bio12058 <[email protected]> • #5121
Re: BioSQL support in Biojava
Sun, 30 Oct 2016 18:04:19 -0400
Hilmar Lapp <[email protected]> • #5120
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