gmane.science.biology.informatics.conductor archive

385 archived articles, newest first (page 1 of 4). Latest articles →

Important announcement about our new support site
Mon, 15 Sep 2014 15:40:48 -0700
Marc Carlson <[email protected]> • #56927
Re: HGU133Plus2 CDF vs hgu133plus2hsentrezgcdf CDF (30% difference in results)
Mon, 15 Sep 2014 18:30:25 -0400
Marcin Cieślik <[email protected]> • #56926
design matrix in limma
Mon, 15 Sep 2014 14:24:01 -0700 (PDT)
"KC [guest]" <[email protected]> • #56925
Re: Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Mon, 15 Sep 2014 21:53:43 +0100
"Dale N. Richardson" <drichardson-Fe/[email protected]> • #56924
Re: Interaction categorical/continuous variable DESeq2
Mon, 15 Sep 2014 19:54:34 +0200
Wolfgang Huber <[email protected]> • #56923
Re: Interaction categorical/continuous variable DESeq2
Mon, 15 Sep 2014 13:50:08 -0400
Michael Love <[email protected]> • #56922
PI position at EMBL-EBI (Cambridge UK)
Mon, 15 Sep 2014 19:36:44 +0200
Wolfgang Huber <[email protected]> • #56921
Re: Error with autoplot of transcriptDB object
Mon, 15 Sep 2014 10:02:15 -0700 (PDT)
Dan Tenenbaum <[email protected]> • #56920
Re: Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Mon, 15 Sep 2014 10:02:03 -0700
Martin Morgan <[email protected]> • #56919
Re: MEDIPS: how does MEDIPS define a methylated region / cluster?
Mon, 15 Sep 2014 10:00:57 -0700
Lukas Chavez <lukas.chavez.mailings-gM/[email protected]> • #56918
Re: Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Mon, 15 Sep 2014 17:53:40 +0100
Thuy Do <[email protected]> • #56917
Re: Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Mon, 15 Sep 2014 17:34:56 +0100
"Dale N. Richardson" <drichardson-Fe/[email protected]> • #56916
Re: Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Mon, 15 Sep 2014 09:27:01 -0700
Son Pham <spham-xrR1t/[email protected]> • #56915
Re: affymetrix probe databases
Mon, 15 Sep 2014 11:33:50 -0400
"James W. MacDonald" <[email protected]> • #56914
Re: HGU133Plus2 CDF vs hgu133plus2hsentrezgcdf CDF (30% difference in results)
Mon, 15 Sep 2014 10:58:20 -0400
"James W. MacDonald" <[email protected]> • #56913
Re: KEGGprofile: "Error in phyper - Non-numeric argument to mathematical function" when using non model organism
Mon, 15 Sep 2014 09:50:07 -0500
zhao shilin <[email protected]> • #56912
Re: Repeat masker sequences as GRanges object
Mon, 15 Sep 2014 13:19:58 +0200
Hermann Norpois <[email protected]> • #56911
Re: MEDIPS: how does MEDIPS define a methylated region / cluster?
Mon, 15 Sep 2014 18:20:17 +0800
Chong Kim San Allen <[email protected]> • #56910
affymetrix probe databases
Mon, 15 Sep 2014 16:40:03 +0200
Pau Marc Muñoz Torres <[email protected]> • #56909
Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Mon, 15 Sep 2014 07:13:09 -0700
Martin Morgan <[email protected]> • #56908
Interaction categorical/continuous variable DESeq2
Mon, 15 Sep 2014 15:41:24 +0200
Hugo Varet <[email protected]> • #56907
NA values in Biomart query
Mon, 15 Sep 2014 11:23:23 +0000
Chapeaublanc Elodie <[email protected]> • #56906
error: "'names' attribute [16] must be the same length as the vector [2]", using Making Organism packages use of makeOrgPackage()
Mon, 15 Sep 2014 10:46:36 +0200
stefano romano <[email protected]> • #56905
Re: export funciton alters ranges in output BED file
Sun, 14 Sep 2014 14:20:33 -0500
John Blischak <[email protected]> • #56904
Re: export funciton alters ranges in output BED file
Sun, 14 Sep 2014 12:18:17 -0700
Hervé Pagès <[email protected]> • #56903
Re: Error using Bsmooth.tstat due to NAs
Sun, 14 Sep 2014 13:48:33 -0400
Kasper Daniel Hansen <[email protected]> • #56902
Re: Error using Bsmooth.tstat due to NAs
Sun, 14 Sep 2014 13:07:23 -0400
Kasper Daniel Hansen <[email protected]> • #56901
export funciton alters ranges in output BED file
Sun, 14 Sep 2014 17:42:41 +0300
do r <[email protected]> • #56900
Re: HGU133Plus2 CDF vs hgu133plus2hsentrezgcdf CDF (30% difference in results)
Sun, 14 Sep 2014 06:51:26 -0700
Steve Lianoglou <lianoglou.steve-RuTDbSqP/[email protected]> • #56899
Re: Packages for GO and KEGG analysis on RNAseq data
Sun, 14 Sep 2014 14:54:39 +1000 (AUS Eastern Standard Time)
Gordon K Smyth <[email protected]> • #56898
DE analysis of PCR array [was: dataset dim for siggenes]
Sun, 14 Sep 2014 13:22:05 +1000 (AUS Eastern Standard Time)
Gordon K Smyth <[email protected]> • #56897
Re: KEGGprofile: "Error in phyper - Non-numeric argument to mathematical function" when using non model organism
Sat, 13 Sep 2014 20:36:33 -0500
zhao shilin <[email protected]> • #56896
HGU133Plus2 CDF vs hgu133plus2hsentrezgcdf CDF (30% difference in results)
Sat, 13 Sep 2014 11:31:55 -0700 (PDT)
"Mahes Muniandy [guest]" <[email protected]> • #56895
Bioinformatics researching Schizophrenia
Sat, 13 Sep 2014 05:56:47 -0700 (PDT)
"Chris Clarkson [guest]" <[email protected]> • #56894
Re: Ask help for Rcpp
Sat, 13 Sep 2014 05:22:41 -0700
Martin Morgan <[email protected]> • #56893
Ask help for Rcpp
Sat, 13 Sep 2014 01:29:53 -0700 (PDT)
"Bo [guest]" <[email protected]> • #56892
topGO: how to visualize gene in GO enriched categories?
Sat, 13 Sep 2014 10:13:20 +0200
stefano romano <[email protected]> • #56891
KEGGprofile: "Error in phyper - Non-numeric argument to mathematical function" when using non model organism
Sat, 13 Sep 2014 10:03:55 +0200
stefano romano <[email protected]> • #56890
Re: positively correlated genes
Fri, 12 Sep 2014 23:53:27 +0000
Sindre Lee <sindre.lee-/[email protected]> • #56889
Changing the x axis size using tracks (ggbio)
Fri, 12 Sep 2014 18:19:36 +0300
Vinicius Henrique da Silva <[email protected]> • #56888
Re: positively correlated genes
Fri, 12 Sep 2014 11:36:54 +0000
Sindre Lee <sindre.lee-/[email protected]> • #56887
Re: MEDIPS: how does MEDIPS define a methylated region / cluster?
Fri, 12 Sep 2014 18:00:01 +0800
Chong Kim San Allen <[email protected]> • #56886
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 14:06:33 +0200
Hermann Norpois <[email protected]> • #56885
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 19:43:30 -0700
Michael Lawrence <lawrence.michael-RuTDbSqP/[email protected]> • #56884
Re: positively correlated genes
Sat, 13 Sep 2014 10:40:31 +1000 (AUS Eastern Standard Time)
Gordon K Smyth <[email protected]> • #56883
Re: positively correlated genes
Sat, 13 Sep 2014 09:10:18 +1000 (AUS Eastern Standard Time)
Gordon K Smyth <[email protected]> • #56882
Re: dataset dim for siggenes
Fri, 12 Sep 2014 19:45:27 -0300 (BRT)
[email protected] • #56881
important announcement
Fri, 12 Sep 2014 15:08:05 -0700
Marc Carlson <[email protected]> • #56880
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 15:06:40 -0700
Hervé Pagès <[email protected]> • #56879
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 14:44:20 -0700
Hervé Pagès <[email protected]> • #56878
Re: dataset dim for siggenes
Fri, 12 Sep 2014 17:11:29 -0400
"James W. MacDonald" <[email protected]> • #56877
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 13:47:47 -0700
Michael Lawrence <lawrence.michael-RuTDbSqP/[email protected]> • #56876
Re: dataset dim for siggenes
Fri, 12 Sep 2014 16:53:49 -0300 (BRT)
[email protected] • #56875
Re: Packages for GO and KEGG analysis on RNAseq data
Fri, 12 Sep 2014 12:40:24 -0700
Steve Lianoglou <lianoglou.steve-RuTDbSqP/[email protected]> • #56874
what drives sample outliers in 450k (detectOutlier, lumi)
Fri, 12 Sep 2014 20:29:24 +0100
Victoria Svinti <[email protected]> • #56873
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 15:29:25 -0400
"James W. MacDonald" <[email protected]> • #56872
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 11:08:10 -0700
Hervé Pagès <[email protected]> • #56871
Re: Packages for GO and KEGG analysis on RNAseq data
Fri, 12 Sep 2014 18:05:40 +0000
"Zhu, Lihua (Julie)" <Julie.Zhu-3WprALB+yeL2fBVCVOL8/[email protected]> • #56870
Packages for GO and KEGG analysis on RNAseq data
Fri, 12 Sep 2014 17:54:07 +0000
Merienne Nicolas <[email protected]> • #56869
Re: dataset dim for siggenes
Fri, 12 Sep 2014 14:39:57 -0300 (BRT)
[email protected] • #56868
Re: [Bioc-devel] AnnotatioDbi Biostrings load order breaks GenomicFiles summary method
Fri, 12 Sep 2014 10:18:02 -0700 (PDT)
Dan Tenenbaum <[email protected]> • #56867
Re: Consensus sequence
Fri, 12 Sep 2014 10:15:54 -0700
Hervé Pagès <[email protected]> • #56866
Re: MEDIPS: how does MEDIPS define a methylated region / cluster?
Fri, 12 Sep 2014 10:12:32 -0700
Lukas Chavez <lukas.chavez.mailings-gM/[email protected]> • #56865
Re: dataset dim for siggenes
Fri, 12 Sep 2014 11:47:55 -0400
"James W. MacDonald" <[email protected]> • #56864
dataset dim for siggenes
Fri, 12 Sep 2014 12:18:29 -0300 (BRT)
[email protected] • #56863
Re: Consensus sequence
Fri, 12 Sep 2014 11:06:47 -0400
"James W. MacDonald" <[email protected]> • #56862
Re: DiffBind annotation
Fri, 12 Sep 2014 14:20:19 +0000
Rory Stark <[email protected]> • #56861
Re: no method for coercing S4 class to a vector
Fri, 12 Sep 2014 15:39:26 +0200
Ninni Nahm <[email protected]> • #56860
Re: Repeat masker sequences as GRanges object
Fri, 12 Sep 2014 06:30:49 -0700
"James W. MacDonald" <[email protected]> • #56859
Re: log2 as input in limma
Fri, 12 Sep 2014 06:24:50 -0700
"James W. MacDonald" <[email protected]> • #56858
Re: no method for coercing S4 class to a vector
Fri, 12 Sep 2014 14:45:06 +0200
Andrzej Oleś <[email protected]> • #56857
Re: error in report(qa) from pkg ShortRead
Fri, 12 Sep 2014 14:40:11 +0200
"Timothée Flutre" <timothee.flutre-t7HN+OaWaD/Sqzrhul/[email protected]> • #56856
Re: power calculation of RNA-Seq
Fri, 12 Sep 2014 07:18:54 -0400
Yanzhu Lin <[email protected]> • #56855
log2 as input in limma
Fri, 12 Sep 2014 03:31:46 -0700 (PDT)
"R [guest]" <[email protected]> • #56854
no method for coercing S4 class to a vector
Fri, 12 Sep 2014 01:27:59 -0700 (PDT)
"Ninni Nahm [guest]" <[email protected]> • #56853
Re: power calculation of RNA-Seq
Thu, 11 Sep 2014 19:32:03 +0000
"Wu, Hao" <[email protected]> • #56852
Repeat masker sequences as GRanges object
Thu, 11 Sep 2014 12:16:59 +0200
Hermann Norpois <[email protected]> • #56851
Re: error in report(qa) from pkg ShortRead
Thu, 11 Sep 2014 14:25:03 -0700
Martin Morgan <[email protected]> • #56850
Re: unable to set sampleNames after combine (from beadarray package) on ExpressionSetIllumina
Thu, 11 Sep 2014 16:41:48 +0100
Mike Smith <[email protected]> • #56849
error in report(qa) from pkg ShortRead
Thu, 11 Sep 2014 17:38:20 +0200
"Timothée Flutre" <timothee.flutre-t7HN+OaWaD/Sqzrhul/[email protected]> • #56848
Re: unable to set sampleNames after combine (from beadarray package) on ExpressionSetIllumina
Thu, 11 Sep 2014 12:17:48 +0100
Adaikalavan Ramasamy <[email protected]> • #56847
Re: 回复： XVector
Wed, 10 Sep 2014 23:15:43 -0700
Hervé Pagès <[email protected]> • #56846
[JOB] NIH-Wide Stadtman Tenure-Track Recruitment
Wed, 10 Sep 2014 11:40:40 -0400
Sean Davis <sdavis2-2loH/[email protected]> • #56845
Re: XVector
Wed, 10 Sep 2014 21:29:35 -0700
Hervé Pagès <[email protected]> • #56844
Re: Consensus sequence
Wed, 10 Sep 2014 16:33:37 -0700
Hervé Pagès <[email protected]> • #56843
Re: Consensus sequence
Wed, 10 Sep 2014 15:44:32 -0700
Hervé Pagès <[email protected]> • #56842
Re: unable to set sampleNames after combine (from beadarray package) on ExpressionSetIllumina
Wed, 10 Sep 2014 12:45:54 -0700
Martin Morgan <[email protected]> • #56841
Re: power calculation of RNA-Seq
Wed, 10 Sep 2014 14:40:51 -0400
Yanzhu Lin <[email protected]> • #56840
how to fetch GO categories from Chinese hamster genome
Wed, 10 Sep 2014 11:32:02 -0700
upendra kumar devisetty <[email protected]> • #56839
Re: GWASTools: quasi-/perfect linear separation
Wed, 10 Sep 2014 11:20:53 -0700
"Stephanie M. Gogarten" <[email protected]> • #56838
Re: power calculation of RNA-Seq
Wed, 10 Sep 2014 13:31:37 -0400
Yanzhu Lin <[email protected]> • #56837
Fwd: [JOB] NIH-Wide Stadtman Tenure-Track Recruitment
Wed, 10 Sep 2014 12:34:55 -0400
Sean Davis <sdavis2-2loH/[email protected]> • #56836
Error using Bsmooth.tstat due to NAs
Wed, 10 Sep 2014 09:18:10 -0700 (PDT)
"Fides Lay [guest]" <[email protected]> • #56835
Re: Organism annotation package created with makeOrgPackage doesn't install properly
Wed, 10 Sep 2014 08:06:44 -0700
"James W. MacDonald" <[email protected]> • #56834
Re: power calculation of RNA-Seq
Wed, 10 Sep 2014 10:50:39 -0400
Zhijin Wu <[email protected]> • #56833
Re: power calculation of RNA-Seq
Wed, 10 Sep 2014 10:13:22 -0400
Sean Davis <sdavis2-2loH/[email protected]> • #56832
Organism annotation package created with makeOrgPackage doesn't install properly
Wed, 10 Sep 2014 07:12:37 -0700 (PDT)
"Lasse Nielsen [guest]" <[email protected]> • #56831
Re: power calculation of RNA-Seq
Wed, 10 Sep 2014 09:21:33 -0400
Yanzhu Lin <[email protected]> • #56830
Workshop Statistical Learning of Biological Systems - Ascona, Switzerland, May 31 to June 5, 2015
Wed, 10 Sep 2014 14:17:22 +0200
Wolfgang Huber <[email protected]> • #56829
Re: barcode support for other platforms
Wed, 10 Sep 2014 07:35:34 -0400
Matthew McCall <[email protected]> • #56828
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