autoconf errors

When I try to compile and make install some standard code (nvclock 
utility in this case) I get the following error:

cd . && autoconf
/usr/bin/autoconf: 
/nfs/users/thunder/cvs/ximian-desktop/autoconf/dest/usr/bin/autom4te: No 
such file or directory
/usr/bin/autoconf: exec: 
/nfs/users/thunder/cvs/ximian-desktop/autoconf/dest/usr/bin/autom4te:
cannot execute: No such file or directory
make: *** [configure] Error 126

any reason why it would be pointing at a cvs directory?  Is there a file 
I can edit that would enable me to compile/install normally?

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