Re: NullPointerException when usingAlignments.getMultipleSequenceAlignment
"Amr AL-Hossary" <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
I agree with you 100%. I have met problems this week in working with the SPICE code too, to the extent that I delayed the whole idea till I have more suitable time to reimplement it myself. Amr -------------------------------------------------- From: "Spencer Bliven" <[email protected]> Sent: Wednesday, October 05, 2011 7:39 PM To: "Andreas Prlic" <[email protected]> Cc: <[email protected]> Subject: Re: [Biojava-l] NullPointerException when usingAlignments.getMultipleSequenceAlignment > In the current SVN code (and therefor probably Biojava 3.0.2), > CookbookMSA.java includes that import statement but is otherwise identical > to the wiki version. It runs just fine for me. Probably updating to > Biojava > 3.0.2 will fix the null pointer exception. > > This does highlight the problem of keeping the wiki synchronized with the > current BioJava version. Ideally, part of the release process could > include > automated updating of the wiki cookbook from the SVN code, with older > versions available as a reference. However, I'm not sure that anyone would > be willing to set up such a complex release process. > > -Spencer > > On Wed, Oct 5, 2011 at 10:21, Andreas Prlic <[email protected]> wrote: > >> Hi Hannes, >> >> > I noticed in an earlier discussion, there was some talk about this too >> > (3-4 months ago, perhaps) and something about a possible fix in SVN. >> > when will it be released on the maven server? >> >> What version are you on? We released Maven 3.0.2 just recently.. >> >> Andreas >> _______________________________________________ >> Biojava-l mailing list - [email protected] >> http://lists.open-bio.org/mailman/listinfo/biojava-l >> > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l