Partial ORGANISM_SCIENTIFIC name returned from PDB 4xcw

Guoying Qi <[email protected]> Thu, 25 Jun 2015 14:38:18 +0100
Newsgroups gmane.comp.java.bio.general
Message-ID <[email protected]>
For PDB 4xcw, only partial organism scientific name returned by the following method:

getOrganismScientific()
org.biojava.nbio.structure.Compound 

HELICOBACTER PYLORI (STRAIN J99 / ATCC 7

I traced back to PDBFileParser,  it seems this PDB file being treated in legacy format and the line length being trimmed into 72.

Can this problem be fixed somehow?

Thanks.

Guoying Qi

_______________________________________________
Biojava-l mailing list  -  [email protected]
http://mailman.open-bio.org/mailman/listinfo/biojava-l