Re: BioSQL support in Biojava

Michael Heuer <[email protected]> Sun, 30 Oct 2016 16:57:13 -0500
Newsgroups gmane.comp.java.bio.general
Message-ID <CAOjYwMw7Jt+yjCx1GbkNwxuatMgR3Ba1Rp6so+t1qFXO=z9ArA@mail.gmail.com>
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Hello Hilmar,

biojava-legacy (1.x releases) is still maintained here

https://github.com/biojava/biojava-legacy

although to be fair the last release (1.9.2) was on 13 Mar 2015.

If you point me to the right place, I should be able to update the BioSQL
doc links.

   michael


On Sun, Oct 30, 2016 at 3:24 PM, Hilmar Lapp <[email protected]> wrote:

> My understanding is that BioSQL support in Biojava is only available in
> the legacy code, 1.x, which is no longer maintained, and is not currently
> supported in the current Biojava version, 3.x.
>
> Could someone verify the correctness of that in principle?
>
> Even better, would someone be willing to update the BioSQL documentation
> on the website accordingly as it pertains to Biojava? The links here all
> still go into subversion repos, but I=E2=80=99m having trouble identifyin=
g where
> they should go instead. If someone were willing to update them, and to
> include a statement as to the current status of support in Biojava, that
> would be much appreciated.
>
>   -hilmar
> --
> Hilmar Lapp -:- lappland.io
>
>
>
>
> _______________________________________________
> Biojava-l mailing list  -  [email protected]
> http://mailman.open-bio.org/mailman/listinfo/biojava-l
>

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<div dir=3D"ltr"><div><div><div>Hello Hilmar,<br><br></div>biojava-legacy (=
1.x releases) is still maintained here<br><br><a href=3D"https://github.com=
/biojava/biojava-legacy">https://github.com/biojava/biojava-legacy<br></a><=
br></div>although to be fair the last release (1.9.2) was on 13 Mar 2015.<b=
r><br>If you point me to the right place, I should be able to update the Bi=
oSQL doc links.<br><br></div><div>=C2=A0=C2=A0 michael<br></div><div><div><=
br></div></div></div><div class=3D"gmail_extra"><br><div class=3D"gmail_quo=
te">On Sun, Oct 30, 2016 at 3:24 PM, Hilmar Lapp <span dir=3D"ltr">&lt;<a h=
ref=3D"mailto:[email protected]" target=3D"_blank">[email protected]</a>&gt=
;</span> wrote:<br><blockquote class=3D"gmail_quote" style=3D"margin:0 0 0 =
.8ex;border-left:1px #ccc solid;padding-left:1ex"><div style=3D"word-wrap:b=
reak-word">My understanding is that BioSQL support in Biojava is only avail=
able in the legacy code, 1.x, which is no longer maintained, and is not cur=
rently supported in the current Biojava version, 3.x.<div><br></div><div>Co=
uld someone verify the correctness of that in principle?</div><div><br></di=
v><div>Even better, would someone be willing to update the BioSQL documenta=
tion on the website accordingly as it pertains to Biojava? The links here a=
ll still go into subversion repos, but I=E2=80=99m having trouble identifyi=
ng where they should go instead. If someone were willing to update them, an=
d to include a statement as to the current status of support in Biojava, th=
at would be much appreciated.</div><span class=3D"HOEnZb"><font color=3D"#8=
88888"><div><br></div><div>=C2=A0 -hilmar<br><div>
<div><div style=3D"font-family:Monaco;font-size:11px">--=C2=A0</div><div st=
yle=3D"font-family:Monaco;font-size:11px">Hilmar Lapp -:-=C2=A0<a href=3D"h=
ttp://lappland.io" target=3D"_blank">lappland.io</a></div></div><div><br></=
div><br class=3D"m_-8367162827936738991Apple-interchange-newline">

</div>
<br></div></font></span></div><br>______________________________<wbr>______=
___________<br>
Biojava-l mailing list=C2=A0 -=C2=A0 <a href=3D"mailto:[email protected]=
en-bio.org">[email protected]</a><br>
<a href=3D"http://mailman.open-bio.org/mailman/listinfo/biojava-l" rel=3D"n=
oreferrer" target=3D"_blank">http://mailman.open-bio.org/<wbr>mailman/listi=
nfo/biojava-l</a><br></blockquote></div><br></div>

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