Re: BioSQL support in Biojava
Michael Heuer <[email protected]> Sun, 30 Oct 2016 16:57:13 -0500
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <CAOjYwMw7Jt+yjCx1GbkNwxuatMgR3Ba1Rp6so+t1qFXO=z9ArA@mail.gmail.com> |
--===============9218312509896415536== Content-Type: multipart/alternative; boundary=001a11410cfe556e8c05401c2e7e --001a11410cfe556e8c05401c2e7e Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Hello Hilmar, biojava-legacy (1.x releases) is still maintained here https://github.com/biojava/biojava-legacy although to be fair the last release (1.9.2) was on 13 Mar 2015. If you point me to the right place, I should be able to update the BioSQL doc links. michael On Sun, Oct 30, 2016 at 3:24 PM, Hilmar Lapp <[email protected]> wrote: > My understanding is that BioSQL support in Biojava is only available in > the legacy code, 1.x, which is no longer maintained, and is not currently > supported in the current Biojava version, 3.x. > > Could someone verify the correctness of that in principle? > > Even better, would someone be willing to update the BioSQL documentation > on the website accordingly as it pertains to Biojava? The links here all > still go into subversion repos, but I=E2=80=99m having trouble identifyin= g where > they should go instead. If someone were willing to update them, and to > include a statement as to the current status of support in Biojava, that > would be much appreciated. > > -hilmar > -- > Hilmar Lapp -:- lappland.io > > > > > _______________________________________________ > Biojava-l mailing list - [email protected] > http://mailman.open-bio.org/mailman/listinfo/biojava-l > --001a11410cfe556e8c05401c2e7e Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable <div dir=3D"ltr"><div><div><div>Hello Hilmar,<br><br></div>biojava-legacy (= 1.x releases) is still maintained here<br><br><a href=3D"https://github.com= /biojava/biojava-legacy">https://github.com/biojava/biojava-legacy<br></a><= br></div>although to be fair the last release (1.9.2) was on 13 Mar 2015.<b= r><br>If you point me to the right place, I should be able to update the Bi= oSQL doc links.<br><br></div><div>=C2=A0=C2=A0 michael<br></div><div><div><= br></div></div></div><div class=3D"gmail_extra"><br><div class=3D"gmail_quo= te">On Sun, Oct 30, 2016 at 3:24 PM, Hilmar Lapp <span dir=3D"ltr"><<a h= ref=3D"mailto:[email protected]" target=3D"_blank">[email protected]</a>>= ;</span> wrote:<br><blockquote class=3D"gmail_quote" style=3D"margin:0 0 0 = .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style=3D"word-wrap:b= reak-word">My understanding is that BioSQL support in Biojava is only avail= able in the legacy code, 1.x, which is no longer maintained, and is not cur= rently supported in the current Biojava version, 3.x.<div><br></div><div>Co= uld someone verify the correctness of that in principle?</div><div><br></di= v><div>Even better, would someone be willing to update the BioSQL documenta= tion on the website accordingly as it pertains to Biojava? The links here a= ll still go into subversion repos, but I=E2=80=99m having trouble identifyi= ng where they should go instead. If someone were willing to update them, an= d to include a statement as to the current status of support in Biojava, th= at would be much appreciated.</div><span class=3D"HOEnZb"><font color=3D"#8= 88888"><div><br></div><div>=C2=A0 -hilmar<br><div> <div><div style=3D"font-family:Monaco;font-size:11px">--=C2=A0</div><div st= yle=3D"font-family:Monaco;font-size:11px">Hilmar Lapp -:-=C2=A0<a href=3D"h= ttp://lappland.io" target=3D"_blank">lappland.io</a></div></div><div><br></= div><br class=3D"m_-8367162827936738991Apple-interchange-newline"> </div> <br></div></font></span></div><br>______________________________<wbr>______= ___________<br> Biojava-l mailing list=C2=A0 -=C2=A0 <a href=3D"mailto:[email protected]= en-bio.org">[email protected]</a><br> <a href=3D"http://mailman.open-bio.org/mailman/listinfo/biojava-l" rel=3D"n= oreferrer" target=3D"_blank">http://mailman.open-bio.org/<wbr>mailman/listi= nfo/biojava-l</a><br></blockquote></div><br></div> --001a11410cfe556e8c05401c2e7e-- --===============9218312509896415536== Content-Type: text/plain; charset="us-ascii" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Content-Disposition: inline _______________________________________________ Biojava-l mailing list - [email protected] http://mailman.open-bio.org/mailman/listinfo/biojava-l --===============9218312509896415536==--