Re: Can't find Bio::ext::Align on CPAN

Warren - this is an old module and not currently maintained, but it should still work. You can find it at https://github.com/bioperl/bioperl-ext
There are some details on installation there. Your mileage may vary, but post to the list if you run into trouble.

Mark Jensen

> On Mar 11, 2021, at 5:43 PM, Warren Gallin <[email protected]> wrote:
> 
> I am trying to use the Bio::Tools::dpAlign module, but the run fails with a message:\
> 
> The C-compiled engine for Smith Waterman alignments (Bio::Ext::Align) has not been installed.
> Please install the bioperl-ext package
> 
> I can not find this package.
> 
> Am I dealing with a no-longer-functional module, or am I missing a pathway to a resource?
> 
> All advice appreciated.
> 
> Warren Gallin_______________________________________________
> Bioperl-l mailing list
> [email protected]
> https://mailman.open-bio.org/mailman/listinfo/bioperl-l