[protege-user] PhD Position in Knowledge Management and Information Retrieval (in the biomedical domain)
"Sahay, Ratnesh" <[email protected]> Thu, 2 Jul 2015 14:46:56 +0000
| Newsgroups | gmane.comp.misc.ontology.protege.owl,gmane.org.w3c.semantic-web,gmane.org.w3c.public-lod,gmane.comp.misc.ontology.protege.general,gmane.org.w3c.working-groups.swhcls,gmane.org.w3c.sparql.devel |
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| Message-ID | <44F1AC90028CFF4697C925D23D5BA59E01DF04CA04@UDSMBX02.uds.nuigalway.ie> |
--===============6906643088690808790== Content-Language: en-US Content-Type: multipart/alternative; boundary="_000_44F1AC90028CFF4697C925D23D5BA59E01DF04CA04UDSMBX02udsnu_" --_000_44F1AC90028CFF4697C925D23D5BA59E01DF04CA04UDSMBX02udsnu_ Content-Type: text/plain; charset="us-ascii" Content-Transfer-Encoding: quoted-printable [Apologies for cross-posting] PhD Position in Knowledge Management and Information Retrieval (in the biom= edical domain) Semantic Web technologies and Linked Open Data are the key to knowledge ric= h domains like Healthcare and Life Sciences (HCLS). The biomedical knowledg= e is represented in clinical data models and coding systems, but also in pu= blic data repositories and formal knowledge representations, such as ontolo= gies. In theory, the large set of existing ontologies cover our conceptual = understanding of the biomedical knowledge, but in practice the mediation be= tween different knowledge repositories is still a challenge considering dat= a integration, data exploitation and even automatic reasoning over data. T= he PhD position will focus on existing and required representations of form= al knowledge to improve information retrieval, summarization, and graph-bas= ed knowledge representation. The work can be extended to apply reasoning o= ver the formal knowledge representations for improved information retrieval= and for the derivation of hidden knowledge. -- Biomedical data resources a= re rich and complex and thus form a challenging knowledge domain, but the o= utcomes of this work will also be relevant to other knowledge domains alike= , for example to develop semantics driven search engine prototypes across h= eterogeneous resources or to define advanced graph based data retrieval app= roaches. The Insight Centre for Data Analytics at the National University of Ireland= , Galway, invites applications for a PhD position in the area of Integratio= n of heterogeneous Data Resources, Information Retrieval, Knowledge Represe= ntation, and Reasoning on Knowledge Representations. The selected candidate= will be embedded in international collaborations and standardization worki= ng groups such as World Wide Web Consortium (W3C), Health Level Seven (HL7)= , BioPortal etc. The candidate will be enabled to publish in high impact in= ternational conferences and journals and to participate in world leading re= search. Eligibility * Four Years Bachelor's Degree or Master's Degree in Computer Scienc= e/Information Technology/BioInformatics/Medical Informatics * Good knowledge of databases principles, at best also object-orient= ed database design * Excellent background in Java programming * Good understanding of semantic Web technologies and Linked Data(RD= F, graph representations) * Interests in formal knowledge representations (graphs, semantic re= sources, ontologies, logics) * Alternative skills: text mining technologies, experience in automa= tic reasoning, ontology alignment Stipend: PhD scholarship stipend of 18,000 Euros per year (i.e., 1500 Euros= per month), no tax. The duration of the contract will be 4 years as a full= y funded PhD. Application procedure Informal enquiries about these positions may be made to: Prof. Dr. Dietrich Rebholz-Schuhmann Insight Centre for Data Analytics NUI Galway, The DERI building IDA Business Park, Lower Dangan Galway, IRELAND Email: [email protected]<mailto:[email protected]> Dr. Ratnesh Sahay Insight Centre for Data Analytics NUI Galway, The DERI building IDA Business Park, Lower Dangan Galway, IRELAND Email: [email protected]<mailto:ratnesh.sahay@insight-centre= .org> When applying, please use the same email addresses above and put " PhD Posi= tion in Knowledge Management and Information Retrieval " in the subject lin= e of your email. Candidates are requested to submit (1) a cover letter expl= aining your intentions, and (2) a CV (in PDF format) giving details on your= academic degrees, working experiences and IT skills (maximum 2 pages). It = is difficult but still advantageous, if you can write a paragraph (e.g. in = the cover letter, or extra), what ambitions in the PhD position appeal most= to you. Interviews will be carried out towards end of July, beginning of August and= possibly also towards the end of August via skype conference call, and the= position can be filled without much delay if required. We expect the succe= ssful candidate to start at the earliest possible date, ideally in August-O= ctober 2015. INSIGHT Centre for Data Analytics (previously DERI http://deri.ie/) http://= www.insight-centre.org/ is a leading research institute in Semantic Web/Lin= ked Data technologies that offers a stimulating, dynamic and multi-cultural= research environment, excellent ties to research-groups worldwide, close c= ollaboration with industrial partners and up-to-date infrastructure and res= ources. --_000_44F1AC90028CFF4697C925D23D5BA59E01DF04CA04UDSMBX02udsnu_ Content-Type: text/html; charset="us-ascii" Content-Transfer-Encoding: quoted-printable <html xmlns:v=3D"urn:schemas-microsoft-com:vml" xmlns:o=3D"urn:schemas-micr= osoft-com:office:office" xmlns:w=3D"urn:schemas-microsoft-com:office:word" = xmlns:m=3D"http://schemas.microsoft.com/office/2004/12/omml" xmlns=3D"http:= //www.w3.org/TR/REC-html40"> <head> <meta http-equiv=3D"Content-Type" content=3D"text/html; charset=3Dus-ascii"= > <meta name=3D"Generator" content=3D"Microsoft Word 14 (filtered medium)"> <style><!-- /* Font Definitions */ @font-face {font-family:Helvetica; 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mso-level-text:\F0B7; mso-level-tab-stop:none; mso-level-number-position:left; text-indent:-18.0pt; font-family:Symbol;} @list l1:level8 {mso-level-number-format:bullet; mso-level-text:o; mso-level-tab-stop:none; mso-level-number-position:left; text-indent:-18.0pt; font-family:"Courier New";} @list l1:level9 {mso-level-number-format:bullet; mso-level-text:\F0A7; mso-level-tab-stop:none; mso-level-number-position:left; text-indent:-18.0pt; font-family:Wingdings;} ol {margin-bottom:0cm;} ul {margin-bottom:0cm;} --></style><!--[if gte mso 9]><xml> <o:shapedefaults v:ext=3D"edit" spidmax=3D"1026" /> </xml><![endif]--><!--[if gte mso 9]><xml> <o:shapelayout v:ext=3D"edit"> <o:idmap v:ext=3D"edit" data=3D"1" /> </o:shapelayout></xml><![endif]--> </head> <body lang=3D"EN-IE" link=3D"blue" vlink=3D"purple"> <div class=3D"WordSection1"> <p class=3D"MsoNormal">[Apologies for cross-posting]<o:p></o:p></p> <p class=3D"MsoNormal" style=3D"text-align:justify"><b><u><o:p><span style= =3D"text-decoration:none"> </span></o:p></u></b></p> <p class=3D"MsoNormal" style=3D"text-align:justify"><b><u>PhD Position in K= nowledge Management and Information Retrieval (in the biomedical domain)<o:= p></o:p></u></b></p> <p class=3D"MsoNormal" style=3D"text-align:justify">Semantic Web technologi= es and Linked Open Data are the key to knowledge rich domains like Healthca= re and Life Sciences (HCLS). The biomedical knowledge is represented in cli= nical data models and coding systems, but also in public data repositories and formal knowledge representations,= such as ontologies. In theory, the large set of existing ontologies cover = our conceptual understanding of the biomedical knowledge, but in practice t= he mediation between different knowledge repositories is still a challenge considering data integration, data explo= itation and even automatic reasoning over data. The PhD position will= focus on existing and required representations of formal knowledge to impr= ove information retrieval, summarization, and graph-based knowledge representation. The work can be extended t= o apply reasoning over the formal knowledge representations for improved in= formation retrieval and for the derivation of hidden knowledge. -- Biomedic= al data resources are rich and complex and thus form a challenging knowledge domain, but the outcomes of this wor= k will also be relevant to other knowledge domains alike, for example to de= velop semantics driven search engine prototypes across heterogeneous resour= ces or to define advanced graph based data retrieval approaches.<o:p></o:p></p> <p class=3D"MsoNormal" style=3D"text-align:justify"><o:p> </o:p></p> <p class=3D"MsoNormal" style=3D"text-align:justify;background:white"><span = lang=3D"EN" style=3D"color:black;mso-fareast-language:EN-GB">The Insight Ce= ntre for Data Analytics at the National University of Ireland, Galway, invi= tes applications for a PhD position in the area of Integration of heterogeneous Data Resources, Information Retrieval= , Knowledge Representation, and Reasoning on Knowledge Representations. The= selected candidate will be embedded in international collaborations and st= andardization working groups such as World Wide Web Consortium (W3C), Health Level Seven (HL7), BioPortal et= c. The candidate will be enabled to publish in high impact international co= nferences and journals and to participate in world leading research. <o:p></o:p></span></p> <p class=3D"MsoNormal" style=3D"text-align:justify;background:white"><span = style=3D"mso-fareast-language:EN-US"><o:p> </o:p></span></p> <pre style=3D"text-align:justify"><b><u><span style=3D"font-size:11.0pt;fon= t-family:"Calibri","sans-serif"">Eligibility</span></u>= </b><span lang=3D"EN" style=3D"font-size:11.0pt;font-family:"Calibri&q= uot;,"sans-serif""> </span><b><u><span style=3D"font-size:11= .0pt;font-family:"Calibri","sans-serif""><o:p></o:p></s= pan></u></b></pre> <p class=3D"MsoListParagraphCxSpFirst" style=3D"margin-bottom:0cm;margin-bo= ttom:.0001pt;mso-add-space:auto;text-indent:-18.0pt;line-height:16.6pt;mso-= list:l0 level1 lfo2;background:white"> <![if !supportLists]><span lang=3D"EN" style=3D"font-family:Symbol;mso-fare= ast-language:EN-GB"><span style=3D"mso-list:Ignore">·<span style=3D"= font:7.0pt "Times New Roman"">  = ; </span></span></span><![endif]><span lang=3D"EN" style=3D"mso-fareast-langu= age:EN-GB">Four Years Bachelor’s Degree or Master’s Degree in C= omputer Science/Information Technology/BioInformatics/Medical Informatics&n= bsp; </span><span lang=3D"EN" style=3D"mso-fareast-language:EN-GB"><o:p></o:p></= span></p> <p class=3D"MsoListParagraphCxSpMiddle" style=3D"margin-bottom:0cm;margin-b= ottom:.0001pt;mso-add-space:auto;text-indent:-18.0pt;line-height:16.6pt;mso= -list:l0 level1 lfo2;background:white"> <![if !supportLists]><span lang=3D"EN" style=3D"font-family:Symbol;mso-fare= ast-language:EN-GB"><span style=3D"mso-list:Ignore">·<span style=3D"= font:7.0pt "Times New Roman"">  = ; </span></span></span><![endif]><span lang=3D"EN" style=3D"mso-fareast-langu= age:EN-GB">Good knowledge of databases principles, at best also object-orie= nted database design <o:p></o:p></span></p> <p class=3D"MsoListParagraphCxSpMiddle" style=3D"margin-bottom:0cm;margin-b= ottom:.0001pt;mso-add-space:auto;text-indent:-18.0pt;line-height:16.6pt;mso= -list:l0 level1 lfo2;background:white"> <![if !supportLists]><span lang=3D"EN" style=3D"font-family:Symbol;mso-fare= ast-language:EN-GB"><span style=3D"mso-list:Ignore">·<span style=3D"= font:7.0pt "Times New Roman"">  = ; </span></span></span><![endif]><span lang=3D"EN" style=3D"mso-fareast-langu= age:EN-GB">Excellent background in Java programming <o:p></o:p></span>= </p> <p class=3D"MsoListParagraphCxSpMiddle" style=3D"margin-bottom:0cm;margin-b= ottom:.0001pt;mso-add-space:auto;text-indent:-18.0pt;line-height:16.6pt;mso= -list:l0 level1 lfo2;background:white"> <![if !supportLists]><span lang=3D"EN" style=3D"font-family:Symbol;mso-fare= ast-language:EN-GB"><span style=3D"mso-list:Ignore">·<span style=3D"= font:7.0pt "Times New Roman"">  = ; </span></span></span><![endif]><span lang=3D"EN" style=3D"mso-fareast-langu= age:EN-GB">Good understanding of semantic Web technologies and Linked Data(= RDF, graph representations)<o:p></o:p></span></p> <p class=3D"MsoListParagraphCxSpMiddle" style=3D"margin-bottom:0cm;margin-b= ottom:.0001pt;mso-add-space:auto;text-indent:-18.0pt;line-height:16.6pt;mso= -list:l0 level1 lfo2;background:white"> <![if !supportLists]><span lang=3D"EN" style=3D"font-family:Symbol;mso-fare= ast-language:EN-GB"><span style=3D"mso-list:Ignore">·<span style=3D"= font:7.0pt "Times New Roman"">  = ; </span></span></span><![endif]><span lang=3D"EN" style=3D"mso-fareast-langu= age:EN-GB">Interests in formal knowledge representations (graphs, semantic = resources, ontologies, logics)<o:p></o:p></span></p> <p class=3D"MsoListParagraphCxSpLast" style=3D"margin-bottom:0cm;margin-bot= tom:.0001pt;mso-add-space:auto;text-indent:-18.0pt;line-height:16.6pt;mso-l= ist:l0 level1 lfo2;background:white"> <![if !supportLists]><span lang=3D"EN" style=3D"font-family:Symbol;mso-fare= ast-language:EN-GB"><span style=3D"mso-list:Ignore">·<span style=3D"= font:7.0pt "Times New Roman"">  = ; </span></span></span><![endif]><span lang=3D"EN" style=3D"mso-fareast-langu= age:EN-GB">Alternative skills: text mining technologies, experience in auto= matic reasoning, ontology alignment<o:p></o:p></span></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <span lang=3D"EN" style=3D"mso-fareast-language:EN-GB"><o:p> </o:p></s= pan></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <b><span lang=3D"EN" style=3D"mso-fareast-language:EN-GB">Stipend:</span></= b><span lang=3D"EN" style=3D"mso-fareast-language:EN-GB"> PhD scholarship s= tipend of 18,000 Euros per year (i.e., 1500 Euros per month), no tax. </span><span lang=3D"EN">The duration of the contract will be 4 years as a = fully funded PhD.</span><span lang=3D"EN" style=3D"mso-fareast-language:EN-= GB"><o:p></o:p></span></p> <pre style=3D"text-align:justify"><span lang=3D"EN" style=3D"font-size:11.0= pt;font-family:"Calibri","sans-serif";mso-fareast-langu= age:EN-GB"><o:p> </o:p></span></pre> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <b><u><span lang=3D"EN">Application procedure </span></u></b><b><u><sp= an lang=3D"EN"><o:p></o:p></span></u></b></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <span lang=3D"EN">Informal enquiries about these positions may be made to:&= nbsp;<b><u><o:p></o:p></u></b></span></p> <p class=3D"MsoNormal" style=3D"text-align:justify;background:white"><b>Pro= f. Dr. Dietrich Rebholz-Schuhmann</b><b><o:p></o:p></b></p> <p class=3D"MsoNormal" style=3D"text-align:justify;background:white"><span = style=3D"color:black">Insight Centre for Data Analytics</span><o:p></o:p></= p> <p class=3D"MsoPlainText"><span style=3D"color:black">NUI Galway, The DERI = building</span><o:p></o:p></p> <p class=3D"MsoPlainText"><span style=3D"color:black">IDA Business Park, Lo= wer Dangan</span><o:p></o:p></p> <p class=3D"MsoPlainText"><span style=3D"color:black">Galway, IRELAND<o:p><= /o:p></span></p> <p class=3D"MsoPlainText"><span style=3D"color:black">Email: </span><a href= =3D"mailto:[email protected]">[email protected]</a><span = style=3D"color:black"> </span><o:p></o:p></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <o:p> </o:p></p> <p class=3D"MsoNormal" style=3D"text-align:justify;background:white"><b>Dr.= Ratnesh Sahay<o:p></o:p></b></p> <p class=3D"MsoNormal" style=3D"text-align:justify;background:white"><span = style=3D"color:black">Insight Centre for Data Analytics</span><o:p></o:p></= p> <p class=3D"MsoPlainText"><span style=3D"color:black">NUI Galway, The DERI = building</span><o:p></o:p></p> <p class=3D"MsoPlainText"><span style=3D"color:black">IDA Business Park, Lo= wer Dangan</span><o:p></o:p></p> <p class=3D"MsoPlainText"><span style=3D"color:black">Galway, IRELAND<o:p><= /o:p></span></p> <p class=3D"MsoPlainText"><span style=3D"color:black">Email: </span><a href= =3D"mailto:[email protected]">[email protected]= rg</a><o:p></o:p></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <span lang=3D"EN"><o:p> </o:p></span></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <span lang=3D"EN">When applying, please use the same email addresses above = and put "</span><span lang=3D"EN"> </span><span lang=3D"EN">PhD Position in Knowledge Management and Informati= on Retrieval " in the subject line of your email. Candidates are = requested to submit (1) a cover letter explaining your intentions, and (2) = a CV (in PDF format) giving details on your academic degrees, working experiences and IT skills (maximum 2 pages). It = is difficult but still advantageous, if you can write a paragraph (e.g. in = the cover letter, or extra), what ambitions in the PhD position appeal most= to you.<o:p></o:p></span></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <span lang=3D"EN"><o:p> </o:p></span></p> <p class=3D"MsoNormal" style=3D"text-align:justify;line-height:16.6pt;backg= round:white"> <span lang=3D"EN">Interviews will be carried out towards end of July, begin= ning of August and possibly also towards the end of August via skype confer= ence call, and the position can be filled without much delay if required. W= e expect the successful candidate to start at the earliest possible date, ideally in August-October 2015.&nb= sp;<o:p></o:p></span></p> <pre style=3D"text-align:justify"><span lang=3D"EN" style=3D"font-size:11.0= pt;font-family:"Calibri","sans-serif""><o:p> </o:p= ></span></pre> <pre style=3D"text-align:justify"><span lang=3D"EN" style=3D"font-size:11.0= pt;font-family:"Calibri","sans-serif"">INSIGHT Centre f= or Data Analytics (previously DERI </span><a href=3D"http://deri.ie/"><span= lang=3D"EN" style=3D"font-size:11.0pt;font-family:"Calibri",&quo= t;sans-serif"">http://deri.ie/</span></a><span lang=3D"EN" style=3D"fo= nt-size:11.0pt;font-family:"Calibri","sans-serif"">) </= span><a href=3D"http://www.insight-centre.org/"><span lang=3D"EN" style=3D"= font-size:11.0pt;font-family:"Calibri","sans-serif"">ht= tp://www.insight-centre.org/</span></a><span lang=3D"EN" style=3D"font-size= :11.0pt;font-family:"Calibri","sans-serif""> is a leadi= ng research institute in Semantic Web/Linked Data technologies that offers = a stimulating, dynamic and multi-cultural research environment, excellent t= ies to research-groups worldwide, close collaboration with industrial partn= ers and up-to-date infrastructure and resources.<o:p></o:p></span></pre> </div> </body> </html> --_000_44F1AC90028CFF4697C925D23D5BA59E01DF04CA04UDSMBX02udsnu_-- --===============6906643088690808790== Content-Type: text/plain; charset="us-ascii" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Content-Disposition: inline _______________________________________________ protege-user mailing list [email protected] https://mailman.stanford.edu/mailman/listinfo/protege-user --===============6906643088690808790==--