Deprecating Bio.PDB.Dice
Peter Cock <[email protected]> Tue, 18 Apr 2017 13:29:44 +0100
| Newsgroups | gmane.comp.python.bio.devel |
|---|---|
| Message-ID | <CAKVJ-_4DYz6yzpmpSwkAQkHVGv2-F0cxhOF6BfC4eoRAbJSrmA__11834.0160967366$1492520977$gmane$org@mail.gmail.com> |
Hello all, This came up in discussion on GitHub issue #820 [*] about turning existing self-tests into proper unit tests for user under TravisCI etc. Bio/PDB/Dice.py is essentially an example of how to write your own selector for use with PDBIO to write a subset of a PDB file. We are proposing to formally deprecate Bio.PDB.Dice (and later remove it [**]), and ideally reuse this as an example script and/or test case. If anyone is using the Dice module, please let us know. Thank you, Peter [*] https://github.com/biopython/biopython/issues/820 [**] http://biopython.org/wiki/Deprecation_policy