Re: Deprecating Bio.PDB.Dice
Peter Cock <[email protected]> Tue, 18 Apr 2017 13:36:39 +0100
| Newsgroups | gmane.comp.python.bio.devel |
|---|---|
| Message-ID | <CAKVJ-_7i9XgifaxU3JatBY0NUuA1QUm9MqAUgDHf7rO_iVEwgw@mail.gmail.com> |
Pull request to do this is here: https://github.com/biopython/biopython/pull/1166 Issue to reuse the code is here: https://github.com/biopython/biopython/issues/1167 On Tue, Apr 18, 2017 at 1:29 PM, Peter Cock <[email protected]> wrote: > Hello all, > > This came up in discussion on GitHub issue #820 [*] about turning > existing self-tests into proper unit tests for user under TravisCI etc. > > Bio/PDB/Dice.py is essentially an example of how to write your > own selector for use with PDBIO to write a subset of a PDB file. > > We are proposing to formally deprecate Bio.PDB.Dice (and later > remove it [**]), and ideally reuse this as an example script and/or > test case. > > If anyone is using the Dice module, please let us know. > > Thank you, > > Peter > > [*] https://github.com/biopython/biopython/issues/820 > [**] http://biopython.org/wiki/Deprecation_policy