Re: ClonalFrameML: Dataset with less computational resourses

Hi Israel,

Thanks, I have just added this test dataset to the github repository.

Best wishes,
Xavier

On Mon, 29 Jan 2024 at 17:35, Komolehin Israel <[email protected]>
wrote:

> Hi Xavier,
>
> > The license is the same as for ClonalFrameML itself, ie GPL-3.0.
> Great. Thank you.
>
> > Would it be useful for you if I added these files to the github
> repository?
>
> Yes. That would be great.
>
> Thank you for your feedback Xavier.
> Regards,
> Israel.
>
>
> On Mon, Jan 29, 2024 at 6:29 PM Xavier Didelot <[email protected]>
> wrote:
>
>> Hi Israel,
>>
>> The license is the same as for ClonalFrameML itself, ie GPL-3.0.
>> Would it be useful for you if I added these files to the github
>> repository?
>>
>> Best wishes,
>> Xavier
>>
>> On Mon, 29 Jan 2024 at 16:24, Komolehin Israel <[email protected]>
>> wrote:
>>
>>> Hi Xavier,
>>>
>>> Thank you for your feedback. This worked pretty well.
>>> Could you please help provide us with the licensing information for
>>> these dataset ?
>>>
>>> Regards,
>>> Israel.
>>>
>>> On Mon, Jan 29, 2024 at 12:59 PM Xavier Didelot <
>>> [email protected]> wrote:
>>>
>>>> Hi Israel,
>>>>
>>>> Cf attached files test.fasta and test.nwk
>>>> The command
>>>> ClonalFrameML test.nwk test.fasta out
>>>> will take less than a second to run.
>>>>
>>>> Best wishes,
>>>> Xavier
>>>>
>>>> On Mon, 29 Jan 2024 at 10:20, Komolehin Israel <
>>>> [email protected]> wrote:
>>>>
>>>>> Hi Xavier,
>>>>>
>>>>> I hope this email finds you well. I'm currently involved in QA testing
>>>>> for med-team packages, including ClonalFrameML. We've encountered a
>>>>> challenge with the dataset provided upstream, which requires around 12
>>>>> hours of computing.
>>>>>
>>>>> To streamline our testing process, would it be possible to provide a
>>>>> lightweight dataset that demands less computing power? Your assistance in
>>>>> this matter would significantly aid our testing efforts.
>>>>>
>>>>> Thank you for your help.
>>>>>
>>>>> Best regards,
>>>>> Israel
>>>>>
>>>>