Re: Failed: phase compiling: r-base34-3.4.4-1 failed
Robert Wyatt <[email protected]>
| Newsgroups | gmane.os.apple.fink.beginners |
|---|---|
| Organization | http://bentones.us/ |
| Message-ID | <[email protected]> |
On 10.14, r-base is r-base35 and r-base36 isn't available: bash-4.4$ fink list r-base Information about 11526 packages read in 16 seconds. r-base 3.5.3-1 Environment for statistical computing r-base33 3.3.3-2 R Framework r-base33-dev 3.3.3-2 R Headers r-base33-shlibs 3.3.3-2 R Libraries r-base34 3.4.3-2 R Framework r-base34-dev 3.4.3-2 R Headers r-base34-shlibs 3.4.3-2 R Libraries r-base35 3.5.3-1 R Framework r-base35-dev 3.5.3-1 R Headers r-base35-shlibs 3.5.3-1 R Libraries Hanspeter Niederstrasser wrote: > On 11/9/19 2:29 PM, Robert Wyatt wrote: >> Just to add a data point, yes, it still fails with the current CLI >> tools (although I didn't try it with the Beta version... would you >> like me to?): >> >> - checking for Xcode version... 11.2 >> - checking for Xcode CLI tools version... 11.2.0.0.1.1571444319 >> >> Package manager version: 0.45.0 >> Distribution version: selfupdate-git Fri Nov 8 12:27:10 2019, >> 10.14.5, x86_64 >> >> * My machine is a: uname -m; sysctl hw.model; sysctl >> machdep.cpu.brand_string >> x86_64 >> hw.model: Macmini6,2 >> machdep.cpu.brand_string: Intel(R) Core(TM) i7-3615QM CPU @ 2.30GHz >> >> installing 'sysdata.rda' >> dyld: lazy symbol binding failed: Symbol not found: _timespec_get >> Referenced from: >> /sw/src/fink.build/r-base35-3.5.3-1/R-3.5.3/lib/libR.dylib >> Expected in: /usr/lib/libSystem.B.dylib >> >> dyld: Symbol not found: _timespec_get >> Referenced from: >> /sw/src/fink.build/r-base35-3.5.3-1/R-3.5.3/lib/libR.dylib >> Expected in: /usr/lib/libSystem.B.dylib >> >> /bin/sh: line 1: 49712 Done echo >> "tools:::sysdata2LazyLoadDB(\"./R/sysdata.rda\",\"../../../library/tools/R\")" >> >> 49713 Abort trap: 6 | R_DEFAULT_PACKAGES=NULL >> LC_ALL=C R_ENABLE_JIT=0 TZ=UTC ../../../bin/R --vanilla --slave >> make[4]: *** [sysdata] Error 134 > > Ugh. According to these: > https://github.com/edenhill/librdkafka/pull/2569 > https://github.com/confluentinc/confluent-kafka-go/issues/383 > https://stackoverflow.com/questions/58386099/macos-throwing-dyld-error-when-running-kafkacat > > > the problem seems to be with Xcode11 with the 10.15 SDK (which can get > installed even on 10.14). Sorry I made you update Xcode. > > Do r-base35 or r-base36 work there? > > @babayoshihiko: This might be another reason to dist restrict the > older r-base packages from 10.15 (and maybe even 10.14 with Xcode11)? > > Hanspeter _______________________________________________ Fink-beginners mailing list [email protected] List archive: https://sourceforge.net/p/fink/mailman/fink-users/ Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-beginners