Re: Update Stuck on hdf5-cpp.100

Hanspeter Niederstrasser <[email protected]>
Newsgroups gmane.os.apple.fink.beginners
Organization Snaggled Works
Message-ID <[email protected]>
On 1/28/20 9:52 AM, Daren Stotler via Fink-beginners wrote:
> Yesterday I began a large fink update that is now stuck on some
> problem with hdf5-cpp.100.
> 
> "fink update-all" gives:
> 
> ----------------------------------------
> Information about 14928 packages read in 1 seconds.
> The following 7 packages will be installed or updated:
>   netcdf-bin netcdf-c11 netcdf-c11-shlibs netcdf-fortran7
> netcdf-fortran7-shlibs texlive-nox
>   texlive-nox-base
> The following 4 additional packages will be installed:
>   hdf5-cpp11 hdf5.10 netcdf-c15 netcdf-c15-shlibs
> The following package might be temporarily removed:
>   lua53-dev
> Default answer will be chosen in 60 seconds...
> Do you want to continue? [Y/n]
> Reading buildlock packages...
> /sw/bin/dpkg-lockwait -i
> /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/hdf5-cpp11_1.8.16-6_darwin-x86_64.deb
> /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/hdf5.10_1.8.16-6_darwin-x86_64.deb
> Selecting previously deselected package hdf5-cpp11.
> dpkg: considering removing hdf5-cpp.100.v1.10 in favour of hdf5-cpp11 ...
> dpkg: yes, will remove hdf5-cpp.100.v1.10 in favour of hdf5-cpp11.
> (Reading database ... 194713 files and directories currently installed.)
> Unpacking hdf5-cpp11 (from .../hdf5-cpp11_1.8.16-6_darwin-x86_64.deb) ...
> Selecting previously deselected package hdf5.10.
> dpkg: considering removing hdf5.100.v1.10 in favour of hdf5.10 ...
> dpkg: yes, will remove hdf5.100.v1.10 in favour of hdf5.10.
> Unpacking hdf5.10 (from .../hdf5.10_1.8.16-6_darwin-x86_64.deb) ...
> Setting up hdf5-cpp11 (1.8.16-6) ...
> Clearing dependency_libs of .la files being installed
> 
> Setting up hdf5.10 (1.8.16-6) ...
> Clearing dependency_libs of .la files being installed
> 
> Reading buildlock packages...
> /sw/bin/dpkg-lockwait -i
> /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/hdf5.100.v1.10_1.10.0-4_darwin-x86_64.deb
> Selecting previously deselected package hdf5.100.v1.10.
> dpkg: considering removing hdf5.10 in favour of hdf5.100.v1.10 ...
> dpkg: yes, will remove hdf5.10 in favour of hdf5.100.v1.10.
> (Reading database ... 194703 files and directories currently installed.)
> Unpacking hdf5.100.v1.10 (from
> .../hdf5.100.v1.10_1.10.0-4_darwin-x86_64.deb) ...
> Setting up hdf5.100.v1.10 (1.10.0-4) ...
> Clearing dependency_libs of .la files being installed
> 
> Reading buildlock packages...
> Could not resolve inconsistent dependencies!
> 
> Fink isn't sure how to install the above packages safely. You may be
> able to fix things by running:
> 
>    fink scanpackages
>    sudo apt-get update
>    sudo apt-get install hdf5-cpp.100.v1.10=1.10.0-4
> 
> Failed: Fink::SysState: Could not resolve inconsistent dependencies

The hdf5 packages have a confusing relationship with each other and that 
sometimes confuses the dependency process. Try manually installing just 
the `netcdf-c11 netcdf-c11-shlibs` packages first, then try `fink 
install update-all` again.

Hanspeter


_______________________________________________
Fink-beginners mailing list
[email protected]
List archive:
https://sourceforge.net/p/fink/mailman/fink-users/
Subscription management:
https://lists.sourceforge.net/lists/listinfo/fink-beginners
lmpx.com only provides a reader for public news (NNTP) servers. It is not affiliated with the servers or forums shown here and is not responsible for the content of articles, which is written by their respective authors.