Re: reg. Failed: phase compiling: gcc5-5.5.0-3 failed

Saleh Elmohamed <[email protected]>
Newsgroups gmane.os.apple.fink.general
Message-ID <CAA1FZy3eet9Sh890dutYjSbXF6mn0zLm8WD8N4uZnYRf0MHOpg@mail.gmail.com>
Hi guys,

Just tried to update fink on this old mac but unfortunately the
updating failed due to:
Downloading the file "fftw-3.3.10.tar.gz" failed...
as shown in the log text below.

Would appreciate any suggestions or thoughts on how
to go about fixing this problem. Thank you.

-Saleh

========================================================

Saleh$ fink selfupdate

ERROR: Downloading packages from the binary distribution is currently only
possible
if Fink is installed at '/opt/sw'.
Default answer will be chosen in 60 seconds...
Continue with the 'UseBinaryDist' option temporarily disabled? [Y/n]
/usr/bin/rsync -az -q  rsync://
distfiles.master.finkmirrors.net/finkinfo//TIMESTAMP /sw/fink/TIMESTAMP.tmp
I will now run the rsync command to retrieve the latest package
descriptions.
/usr/bin/rsync -rtz --delete-after --delete -q   --include='10.9-libcxx/'
--include='10.9-libcxx/stable/' --include='10.9-libcxx/stable/main/'
--include='10.9-libcxx/stable/main/finkinfo/'
--include='10.9-libcxx/stable/main/finkinfo/*/'
--include='10.9-libcxx/stable/main/finkinfo/*'
--include='10.9-libcxx/stable/main/finkinfo/**/*' --include='VERSION'
--include='DISTRIBUTION' --include='README' --exclude='**' 'rsync://
distfiles.master.finkmirrors.net/finkinfo' '/sw/fink/'
Scanning package description files..........
Information about 18290 packages read in 3 seconds.
No packages to install.

The core packages have been updated. You should now update the other
packages using commands like 'fink
update-all'.


Saleh$ fink update-all

ERROR: Downloading packages from the binary distribution is currently only
possible
if Fink is installed at '/opt/sw'.
Default answer will be chosen in 60 seconds...
Continue with the 'UseBinaryDist' option temporarily disabled? [Y/n]
Information about 18290 packages read in 23 seconds.
The following 158 packages will be installed or updated:
 arpack-ng arpack-ng-shlibs auctex autoconf2.6 autogen autogen-dev
autogen-shlibs bison expat1
 expat1-shlibs fftw3 fftw3-shlibs fig2dev fink-buildenv-modules
fink-package-precedence freeglut2
 freeglut2-shlibs fribidi-dev fribidi-shlibs gawk gcc5-compiler gcc5-shlibs
gcc6-compiler gcc6-shlibs
 gcc7-shlibs gcc8-shlibs gcc9-compiler gcc9-shlibs gd3 gd3-bin gd3-shlibs
gdbm4 gdbm4-shlibs
 graphicsmagick1322-dev graphicsmagick1322-shlibs gstreamer-0.10
gstreamer-0.10-dev
 gstreamer-0.10-shlibs hdf5.9 hdf5.9-bin hdf5.9-shlibs
imagemagick6.9.q16-common imlib2 imlib2-shlibs
 info intltool40 kpathsea libcurl4 libcurl4-shlibs libemf libemf-shlibs
libgcrypt20 libgcrypt20-shlibs
 libgpg-error libgpg-error-shlibs libharfbuzz0-dev libharfbuzz0-shlibs
libheif1-dev libheif1-shlibs
 libidn libidn-shlibs libidn2.0-shlibs libimagequant0 libimagequant0-shlibs
libjpeg-bin libjpeg9
 libjpeg9-shlibs libkpathsea6 libkpathsea6-shlibs libmagick++6.9.q16.6-dev
libmagick++6.9.q16.6-shlibs
 libmagickcore6.9.q16.2-dev libmagickcore6.9.q16.2-shlibs
libmagickwand6.9.q16.2-dev
 libmagickwand6.9.q16.2-shlibs libopenjp2.7 libopenjp2.7-shlibs libpcre1
libpcre1-shlibs libraqm0-dev
 libraqm0-shlibs libtasn1-6-dev libtasn1-6-shlibs libtheora0
libtheora0-shlibs libtheoradec1-shlibs
 libtheoraenc1-shlibs libtiff-bin libtiff5 libtiff5-shlibs libtool2
libtool2-shlibs libunistring2
 libunistring2-shlibs libwebp7 libwebp7-shlibs libx265.79-dev
libx265.79-shlibs libxml2-py27 libzip2
 libzip2-shlibs libzstd1-dev libzstd1-shlibs locale-textdomain-pm5182
module-build-pm nasm netpbm-bin
 netpbm11-shlibs ocaml openldap24-dev openldap24-shlibs openssl100-shlibs
openssl110-dev
 openssl110-shlibs perl5162-core po4a poppler-data poppler46-shlibs
poppler8-glib poppler8-glib-shlibs
 preview-latex pstoedit-bin pstoedit-shlibs ptexenc1 ptexenc1-shlibs
python27 python27-shlibs
 qhull6.3.1-dev qhull6.3.1-shlibs qrupdate qrupdate-shlibs qt5-mac-linguist
qt5-mac-qcocoa-plugin
 qt5-mac-qtbase qt5-mac-qtbase-dev-tools qt5-mac-qtconcurrent-shlibs
qt5-mac-qtcore-shlibs
 qt5-mac-qtdbus-shlibs qt5-mac-qtgui-shlibs qt5-mac-qtnetwork-shlibs
qt5-mac-qtopengl-shlibs
 qt5-mac-qtprintsupport-shlibs qt5-mac-qtsql-shlibs qt5-mac-qttest-shlibs
qt5-mac-qtwidgets-shlibs
 qt5-mac-qtxml-shlibs readline6-shlibs readline7-shlibs readline8
readline8-shlibs sqlite3-dev
 sqlite3-shlibs teckit-dev teckit-shlibs texinfo texlive-nox-base
texlive-texmf xinitrc
The following 59 additional packages will be installed:
 fink-obsolete-packages gcc11-compiler gcc11-shlibs glew2.2 glew2.2-shlibs
gnulib gsasl9-dev
 gsasl9-shlibs guile22 guile22-dev guile22-libs guile22-shlibs gyp-py27
ilmbase24-dev ilmbase24-shlibs
 imagemagick7.q16-common isl2 isl22 isl22-shlibs libmagick++7.q16.5-dev
libmagick++7.q16.5-shlibs
 libmagickcore7.q16.9-dev libmagickcore7.q16.9-shlibs
libmagickwand7.q16.9-dev
 libmagickwand7.q16.9-shlibs libmpfr6 libnss3 libnss3-shlibs
libopenexr24-dev libopenexr24-shlibs
 libopenjpeg1 libpotrace0 libpotrace0-shlibs libraw20-dev libraw20-shlibs
libwoff2-1.0.2-dev
 libwoff2-1.0.2-shlibs libxxhash0-dev libxxhash0-shlibs ninja nspr.0e
nspr.0e-shlibs poppler63
 poppler63-shlibs qt5-mac-qtdeclarative qt5-mac-qtlocation
qt5-mac-qtlocation-shlibs
 qt5-mac-qtpositioning-shlibs qt5-mac-qtqml-shlibs qt5-mac-qtquick-shlibs
 qt5-mac-qtquickparticles-shlibs qt5-mac-qtquicktest-shlibs
qt5-mac-qtquickwidgets-shlibs
 qt5-mac-qtsql-sqlite-plugins qt5-mac-qtxmlpatterns
qt5-mac-qtxmlpatterns-shlibs re2c
 setuptools-tng-py27 szip
The following 5 packages might be temporarily removed:
 freeglut2 gd3 libjpeg9 lua53-dev openldap24-dev
Default answer will be chosen in 60 seconds...
Do you want to continue? [Y/n]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
http://distfiles.master.finkmirrors.net/distfiles/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
100   277  100   277    0     0   1745      0 --:--:-- --:--:-- --:--:--
 1753
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror
(3) Retry another mirror from your continent
(4) Retry another mirror
(5) Retry using original source URL

Default answer will be chosen in 120 seconds...
How do you want to proceed? [3]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
http://distfiles.yeg.ab.ca.finkmirrors.net/distfiles/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
100   280  100   280    0     0   2072      0 --:--:-- --:--:-- --:--:--
 2058
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror
(3) Retry another mirror
(4) Retry using original source URL

Default answer will be chosen in 120 seconds...
How do you want to proceed? [4]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
https://www.fftw.org/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror

Default answer will be chosen in 120 seconds...
How do you want to proceed? [2]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
https://www.fftw.org/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror

Default answer will be chosen in 120 seconds...
How do you want to proceed? [2]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
https://www.fftw.org/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror

Default answer will be chosen in 120 seconds...
How do you want to proceed? [2]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
https://www.fftw.org/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror

Default answer will be chosen in 120 seconds...
How do you want to proceed? [2]
curl --connect-timeout 30 -f -L -A 'fink/0.45.6' -O
https://www.fftw.org/fftw-3.3.10.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time
 Current
                                 Dload  Upload   Total   Spent    Left
 Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--
  0
curl: (60) SSL certificate problem: certificate has expired
More details here: https://curl.haxx.se/docs/sslcerts.html

curl performs SSL certificate verification by default, using a "bundle"
 of Certificate Authority (CA) public keys (CA certs). If the default
 bundle file isn't adequate, you can specify an alternate file
 using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
 the bundle, the certificate verification probably failed due to a
 problem with the certificate (it might be expired, or the name might
 not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
 the -k (or --insecure) option.
HTTPS-proxy has similar options --proxy-cacert and --proxy-insecure.
### execution of curl failed, exit code 60
Downloading the file "fftw-3.3.10.tar.gz" failed.

(1) Give up
(2) Retry the same mirror

Default answer will be chosen in 120 seconds...
How do you want to proceed? [1]
Failed: file download failed for fftw-3.3.10.tar.gz of package
fftw3-3.3.10-2

=========================================

On Wed, Nov 20, 2019 at 9:20 PM Alexander Hansen <
[email protected]> wrote:

>
>
> On Nov 20, 2019, at 15:58, Saleh Elmohamed <[email protected]>
> wrote:
>
> Very sorry but this still not working and
> still getting pretty much the same error
> message.
>
>
> On Sat, Nov 9, 2019 at 2:21 AM Hanspeter Niederstrasser <
> [email protected]> wrote:
>
>> On 11/8/19 9:00 PM, Saleh Elmohamed wrote:
>> > Thanks for any helpful pointers on the following
>> > error ...
>> > -S
>> > =====================================
>> > ...
>> > ...
>> > ...
>> > patching file fixincludes/fixincl.x
>> > patching file fixincludes/inclhack.def
>> > patch -p1 <
>> /sw/fink/dists/stable/main/finkinfo/languages/gcc5-apfs.patch
>> > patching file libstdc++-v3/include/Makefile.in
>> > Hunk #1 succeeded at 1695 (offset 1 line).
>> > # autoconf2.6ish patch for modern XQuartz paths
>> > perl -pi -e "s|/usr/lpp/Xamples|/opt/X11|" libjava/configure
>> > # don't update live infodoc dir
>> > find . -name Makefile.in | xargs perl -pi -e 's/install-info
>> > --version/false/g'
>> > # make remove_duplicates() sandbox friendly
>> > perl -pi.bak -e "s|if \(errno \!\= ENOENT\)|if \(\(errno \!\= ENOENT\)
>> \&\&
>> > \(errno \!\= EPERM\)\)|g" gcc/incpath.c
>> > sudo -u fink-bld [ENV] sh -c /tmp/fink.KBitq
>> > /tmp/fink.chLsL
>> > #!/bin/bash -ev
>> > set +x
>> > if [ -e /usr/local/lib/libgmp.a ] || [ -e /usr/local/lib/libgmp.dylib ];
>> > then
>> > echo "-----WARNING-----WARNING-----WARNING-----"
>> > echo "You seem to have GMP installed in /usr/local."
>> > echo "This is known to cause gcc5 to fail to build."
>> > echo "Please move aside /usr/local and try again."
>> > echo "-----WARNING-----WARNING-----WARNING-----"
>> > exit 1
>> > else
>> > echo "Good, /usr/local/lib/libgmp* not present."
>> > fi
>> > -----WARNING-----WARNING-----WARNING-----
>> > You seem to have GMP installed in /usr/local.
>> > This is known to cause gcc5 to fail to build.
>> > Please move aside /usr/local and try again.
>> > -----WARNING-----WARNING-----WARNING-----
>>
>> You have a non-Fink copy of GMP installed into /usr/local. This will
>> break Fink things. Temporarily move /usr/local (eg to /usr/local-moved)
>> and try rebuilding gcc5.
>>
>> Hanspeter
>>
> _______________________________________________
>
>
> If you moved /usr/local then you shouldn’t have the same error.  Please
> post the actual error message that you’re seeing now.
>
> f your OS version doesn’t let you rename the whole /usr/local directory (I
> don’t remember when this was introduced) then try “mv /usr/local/lib
> /usr/local/lib.moved”.
>
> --
> Alexander Hansen, Ph.D.
> Fink User Liaison
>
>

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