error on qsub/mpirun jobs
Zhiliang Hu <[email protected]> Fri, 05 Sep 2008 15:55:39 -0500
| Newsgroups | gmane.science.biology.informatics.clusters |
|---|---|
| Message-ID | <[email protected]> |
I have a a mpiblast job that runs well on command line ("mpirun").
But have errors when "qsub" to run:
qsub -l nodes=6:ppn=2
-e /path/to/locationA
-o /path/to/locationA
/path/to/program
----------------------------------------------------------
Unable to copy file /var/spool/torque/spool/658.nagrp2..ER to
hu@hist:/raid/pub/ncbi/blast/www/mpiblast.tmp
>>> error from copy
Host key verification failed.
lost connection
>>> end error output
Output retained on that host in: /var/spool/torque/undelivered/658.nagrp2..ER
----------------------------------------------------------
Note: When manually check, the "retained" file is not there:
"/var/spool/torque/undelivered/658.nagrp2..ER"
I wonder why "Host key verification failed"? Could this be the cause?
(I can ssh to all nodes no problem)
Any hint to look further is appreciated.
Zhiliang