[Biopython] Error with DSSP module
Hrishikesh Dhondge <[email protected]> Tue, 13 Apr 2021 15:50:54 +0200
| Newsgroups | gmane.comp.python.bio.general |
|---|---|
| Message-ID | <CAEA0_ZuiHzJT716UWky+3aiXkY9BQOXdzcegMoSShN9Nh=dvhg@mail.gmail.com> |
Hello everyone, I'm facing a problem with the DSSP module in Biopython. I am trying to compute solvent accessible surface area from the PDB file. I used the same block of code as given in the biopython wiki: https://biopython.org/docs/1.78/api/Bio.PDB.DSSP.html?highlight=dssp#module-Bio.PDB.DSSP But after running it returns nothing and gives the following error: a_key = list(dssp.keys())[2] IndexError: list index out of range Any suggestions would be appreciated. Thanks in advance! -- With regards Hrishikesh Dhondge _______________________________________________ Biopython mailing list - [email protected] https://mailman.open-bio.org/mailman/listinfo/biopython